RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 CLN6Q9NWW5 311 aa13.33□□□□□ -0.27
SCARF1-201ENST00000263071 LSM7Q9UK45 103 aaKnown RBP13.33□□□□□ -0.27
SCARF1-201ENST00000263071 CHD5Q8TDI0 1954 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 H7C4K7 107 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 ADAMDEC1O15204 470 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 CYBAP13498 195 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 ZNF8P17098 575 aaPredicted RBP13.33□□□□□ -0.28
SCARF1-201ENST00000263071 TRHRP34981 398 aaPredicted RBP13.33□□□□□ -0.28
SCARF1-201ENST00000263071 GPR143P51810 404 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 CDK6Q00534 326 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 SRSF11Q05519 484 aaKnown RBP13.33□□□□□ -0.28
SCARF1-201ENST00000263071 SLBPQ14493 270 aaKnown RBP eCLIP13.33□□□□□ -0.28
SCARF1-201ENST00000263071 LRRN1Q6UXK5 716 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 CASP12Q6UXS9 341 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 TMEM17Q86X19 198 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 FAM181AQ8N9Y4 354 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 CAMKVQ8NCB2 501 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 OR2AP1Q8NGE2 309 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 NEIL2Q969S2 332 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 TMEM169Q96HH4 297 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 DDOQ99489 341 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 CAPN10Q9HC96 672 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 EXO1Q9UQ84 846 aaKnown RBP13.33□□□□□ -0.28
SCARF1-201ENST00000263071 TET1Q8NFU7 2136 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 C1orf196B1AJZ1 125 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 ZNF670-ZNF695F2Z2N8 137 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 RP2O75695 350 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 ADRA2AP08913 450 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 COX5BP10606 129 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 ATP1B2P14415 290 aaPredicted RBP13.33□□□□□ -0.28
SCARF1-201ENST00000263071 KCNJ10P78508 379 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 PTSQ03393 145 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 GCNT6Q5T4J0 391 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 ELP2Q6IA86 826 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 USP30Q70CQ3 517 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 RBM18Q96H35 190 aaKnown RBP13.33□□□□□ -0.28
SCARF1-201ENST00000263071 POM121Q96HA1 1249 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 SUV39H2Q9H5I1 410 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 TBC1D17Q9HA65 648 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 DLL4Q9NR61 685 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 MARK1Q9P0L2 795 aa13.33□□□□□ -0.28
SCARF1-201ENST00000263071 LCMT2O60294 686 aaKnown RBP13.32□□□□□ -0.28
SCARF1-201ENST00000263071 EOMESO95936 686 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 PTPN6P29350 595 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 SLC16A1P53985 500 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 AP1S1P61966 158 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 ZNF697Q5TEC3 545 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 TMEM220Q6QAJ8 160 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 NAA40Q86UY6 237 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 CALHM3Q86XJ0 350 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 SYT14Q8NB59 555 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 OR14A16Q8NHC5 309 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 GATAD2BQ8WXI9 593 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 CLP1Q92989 425 aaKnown RBP13.32□□□□□ -0.28
SCARF1-201ENST00000263071 S100PBPQ96BU1 408 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 OR2M2Q96R28 347 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 NLNQ9BYT8 704 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 SPIN1Q9Y657 262 aaPredicted RBP13.32□□□□□ -0.28
SCARF1-201ENST00000263071 ALPK2Q86TB3 2170 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 GPR31O00270 319 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 FRS3O43559 492 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 PAK4O96013 591 aaPredicted RBP13.32□□□□□ -0.28
SCARF1-201ENST00000263071 RAB2AP61019 212 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 SMAD4Q13485 552 aaKnown RBP13.32□□□□□ -0.28
SCARF1-201ENST00000263071 PIN1Q13526 163 aaPredicted RBP13.32□□□□□ -0.28
SCARF1-201ENST00000263071 GPR176Q14439 515 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 EIF4HQ15056 248 aaKnown RBP13.32□□□□□ -0.28
SCARF1-201ENST00000263071 SSX1Q16384 188 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 SFRP5Q5T4F7 317 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 ATCAYQ86WG3 371 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 HGDQ93099 445 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 GSDMCQ9BYG8 508 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 ALX4Q9H161 411 aaPredicted RBP13.32□□□□□ -0.28
SCARF1-201ENST00000263071 WNT5BQ9H1J7 359 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 KLHL31Q9H511 634 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 KCNK12Q9HB15 430 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 EPHA6Q9UF33 1036 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 TRBV5-3A0A0A0MS03 114 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 TRBV4-1A0A0J9YWV2 114 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 GPR171O14626 319 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 SERPINA3P01011 423 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 ATP5A1P25705 553 aaKnown RBP13.32□□□□□ -0.28
SCARF1-201ENST00000263071 GGT2P36268 569 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 GZMMP51124 257 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 ITGA1P56199 1179 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 RAB8AP61006 207 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 SNRPD1P62314 119 aaKnown RBP13.32□□□□□ -0.28
SCARF1-201ENST00000263071 FKBP1BP68106 108 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 TLE2Q04725 743 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 OR2G6Q5TZ20 316 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 C17orf99Q6UX52 265 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 CEACAM20Q6UY09 585 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 SSX6Q7RTT6 188 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 WDR53Q7Z5U6 358 aaPredicted RBP13.32□□□□□ -0.28
SCARF1-201ENST00000263071 TMIEQ8NEW7 156 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 LMAN2LQ9H0V9 348 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 REEP4Q9H6H4 257 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 SLCO1C1Q9NYB5 712 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 ZNF226Q9NYT6 803 aa13.32□□□□□ -0.28
SCARF1-201ENST00000263071 RUVBL1Q9Y265 456 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms