RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 TMEM173Q86WV6 379 aaPredicted RBP14.03□□□□□ -0.16
XRCC1-201ENST00000262887 OR5D16Q8NGK9 328 aa14.03□□□□□ -0.16
XRCC1-201ENST00000262887 OR8K3Q8NH51 312 aa14.03□□□□□ -0.16
XRCC1-201ENST00000262887 CXorf58Q96LI9 332 aa14.03□□□□□ -0.16
XRCC1-201ENST00000262887 SLC22A12Q96S37 553 aa14.03□□□□□ -0.16
XRCC1-201ENST00000262887 ISG20L2Q9H9L3 353 aaKnown RBP14.03□□□□□ -0.16
XRCC1-201ENST00000262887 PCDHB16Q9NRJ7 776 aa14.03□□□□□ -0.16
XRCC1-201ENST00000262887 NLGN3Q9NZ94 848 aa14.03□□□□□ -0.16
XRCC1-201ENST00000262887 A0A087WUU8 490 aa14.03□□□□□ -0.16
XRCC1-201ENST00000262887 PRAMEF27A3QJZ7 478 aa14.03□□□□□ -0.16
XRCC1-201ENST00000262887 PPP2R1BP30154 601 aa14.03□□□□□ -0.16
XRCC1-201ENST00000262887 BUD31P41223 144 aaPredicted RBP14.03□□□□□ -0.16
XRCC1-201ENST00000262887 GATMP50440 423 aa14.03□□□□□ -0.16
XRCC1-201ENST00000262887 DGCR2P98153 550 aa14.03□□□□□ -0.16
XRCC1-201ENST00000262887 AADACL4Q5VUY2 407 aa14.03□□□□□ -0.16
XRCC1-201ENST00000262887 MOSPD2Q8NHP6 518 aa14.03□□□□□ -0.16
XRCC1-201ENST00000262887 GNPDA2Q8TDQ7 276 aa14.03□□□□□ -0.16
XRCC1-201ENST00000262887 WDR34Q96EX3 536 aa14.03□□□□□ -0.16
XRCC1-201ENST00000262887 SAV1Q9H4B6 383 aaPredicted RBP14.03□□□□□ -0.16
XRCC1-201ENST00000262887 KCNK12Q9HB15 430 aa14.03□□□□□ -0.16
XRCC1-201ENST00000262887 SLC39A1Q9NY26 324 aa14.03□□□□□ -0.16
XRCC1-201ENST00000262887 MARK1Q9P0L2 795 aa14.03□□□□□ -0.16
XRCC1-201ENST00000262887 CARNS1A5YM72 827 aa14.02□□□□□ -0.16
XRCC1-201ENST00000262887 PRSS44E7EML9 344 aa14.02□□□□□ -0.16
XRCC1-201ENST00000262887 RGS11O94810 467 aa14.02□□□□□ -0.16
XRCC1-201ENST00000262887 LATS1O95835 1130 aa14.02□□□□□ -0.16
XRCC1-201ENST00000262887 ALDOBP05062 364 aa14.02□□□□□ -0.16
XRCC1-201ENST00000262887 DRD5P21918 477 aa14.02□□□□□ -0.16
XRCC1-201ENST00000262887 TRIM23P36406 574 aa14.02□□□□□ -0.16
XRCC1-201ENST00000262887 MAPK9P45984 424 aa14.02□□□□□ -0.16
XRCC1-201ENST00000262887 GRIN2CQ14957 1233 aa14.02□□□□□ -0.16
XRCC1-201ENST00000262887 TMEM44Q2T9K0 475 aa14.02□□□□□ -0.16
XRCC1-201ENST00000262887 TMEM151BQ8IW70 566 aa14.02□□□□□ -0.16
XRCC1-201ENST00000262887 CMIPQ8IY22 773 aa14.02□□□□□ -0.16
XRCC1-201ENST00000262887 BBS1Q8NFJ9 593 aa14.02□□□□□ -0.16
XRCC1-201ENST00000262887 SLC5A11Q8WWX8 675 aa14.02□□□□□ -0.16
XRCC1-201ENST00000262887 ZFP3Q96NJ6 502 aa14.02□□□□□ -0.16
XRCC1-201ENST00000262887 FCRL4Q96PJ5 515 aa14.02□□□□□ -0.16
XRCC1-201ENST00000262887 C7orf50Q9BRJ6 194 aaKnown RBP14.02□□□□□ -0.16
XRCC1-201ENST00000262887 SIRT3Q9NTG7 399 aaPredicted RBP14.02□□□□□ -0.16
XRCC1-201ENST00000262887 TRPC4Q9UBN4 977 aa14.02□□□□□ -0.16
XRCC1-201ENST00000262887 SLC5A10A0PJK1 596 aa14.02□□□□□ -0.17
XRCC1-201ENST00000262887 SLC9B1P1A6NJY1 282 aa14.02□□□□□ -0.17
XRCC1-201ENST00000262887 A8MXK9 166 aa14.02□□□□□ -0.17
XRCC1-201ENST00000262887 IFNGR2P38484 337 aa14.02□□□□□ -0.17
XRCC1-201ENST00000262887 MMP15P51511 669 aa14.02□□□□□ -0.17
XRCC1-201ENST00000262887 FZD5Q13467 585 aa14.02□□□□□ -0.17
XRCC1-201ENST00000262887 FAM26DQ5JW98 314 aa14.02□□□□□ -0.17
XRCC1-201ENST00000262887 Q6ZVL8 140 aa14.02□□□□□ -0.17
XRCC1-201ENST00000262887 LILRB2Q8N423 598 aa14.02□□□□□ -0.17
XRCC1-201ENST00000262887 EXOSC8Q96B26 276 aaKnown RBP14.02□□□□□ -0.17
XRCC1-201ENST00000262887 FAM46AQ96IP4 442 aaKnown RBP14.02□□□□□ -0.17
XRCC1-201ENST00000262887 CHIAQ9BZP6 476 aa14.02□□□□□ -0.17
XRCC1-201ENST00000262887 DDX31Q9H8H2 851 aaKnown RBP14.02□□□□□ -0.17
XRCC1-201ENST00000262887 NKIRAS2Q9NYR9 191 aa14.02□□□□□ -0.17
XRCC1-201ENST00000262887 EMC3Q9P0I2 261 aa14.02□□□□□ -0.17
XRCC1-201ENST00000262887 PFDN2Q9UHV9 154 aa14.02□□□□□ -0.17
XRCC1-201ENST00000262887 CLEC4AQ9UMR7 237 aa14.02□□□□□ -0.17
XRCC1-201ENST00000262887 SIRT4Q9Y6E7 314 aaPredicted RBP14.02□□□□□ -0.17
XRCC1-201ENST00000262887 L7N2F9 121 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 RTCAO00442 366 aaKnown RBP14.01□□□□□ -0.17
XRCC1-201ENST00000262887 FGF18O76093 207 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 C1orf105O95561 183 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 ANKRD34CP0C6C1 535 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 XPAP23025 273 aaPredicted RBP14.01□□□□□ -0.17
XRCC1-201ENST00000262887 HTRA3P83110 453 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 PITPNAQ00169 270 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 BDH1Q02338 343 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 ELAVL2Q12926 359 aaKnown RBP14.01□□□□□ -0.17
XRCC1-201ENST00000262887 TSPAN31Q12999 210 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 SNTB2Q13425 540 aaKnown RBP14.01□□□□□ -0.17
XRCC1-201ENST00000262887 FAM27D1Q5T7N8 215 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 SLC22A10Q63ZE4 541 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 LRFN4Q6PJG9 635 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 NXPE4Q6UWF7 544 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 FAM83HQ6ZRV2 1179 aaPredicted RBP14.01□□□□□ -0.17
XRCC1-201ENST00000262887 HSD11B1LQ7Z5J1 315 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 SLC9B2Q86UD5 537 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 RASGEF1AQ8N9B8 481 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 OR51G2Q8NGK0 314 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 TEX12Q9BXU0 123 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 C20orf85Q9H1P6 137 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 OR51I1Q9H343 314 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 H2AFY2Q9P0M6 372 aaPredicted RBP14.01□□□□□ -0.17
XRCC1-201ENST00000262887 RPS6KB2Q9UBS0 482 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 XIRP2A4UGR9 3374 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 FRMPD3Q5JV73 1810 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 LGALS8O00214 317 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 SURF4O15260 269 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 PEX14O75381 377 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 UBL3O95164 117 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 EPPINO95925 133 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 TFP02787 698 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 FCER2P06734 321 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 NMBP08949 121 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 GNSP15586 552 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 CXCL2P19875 107 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 TAS2R41P59536 307 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 C22orf39Q6P5X5 142 aa14.01□□□□□ -0.17
XRCC1-201ENST00000262887 RRM2BQ7LG56 351 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms