RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ZNF730Q6ZMV8 503 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 ZNF546Q86UE3 836 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 REM2Q8IYK8 340 aaPredicted RBP6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 TMEM102Q8N9M5 508 aaPredicted RBP6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 LMNTD1Q8N9Z9 388 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 OR5M9Q8NGP3 310 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 SLCO2A1Q92959 643 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 SPATA13Q96N96 652 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 CDK15Q96Q40 435 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 STACQ99469 402 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 OR8D2Q9GZM6 311 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 CENPMQ9NSP4 180 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 MMACHCQ9Y4U1 282 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 LRCH4O75427 683 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 AMHP03971 560 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 NFATC2Q13469 925 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 HTR4Q13639 388 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 ARSJQ5FYB0 599 aaPredicted RBP6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 SERPINA9Q86WD7 417 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 CBLN2Q8IUK8 224 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 DTD2Q96FN9 168 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 RSRP1Q9BUV0 290 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 GPRC5CQ9NQ84 441 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 ABHD14A-ACY1A0A1B0GW23 586 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 PDE6DO43924 150 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 PIGPP57054 158 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 SPIBQ01892 262 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 HFEQ30201 348 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 PRPF38BQ5VTL8 546 aaKnown RBP6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 VASH2Q86V25 355 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 VSIG10LQ86VR7 867 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 SYT14Q8NB59 555 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 CYP2W1Q8TAV3 490 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 CASD1Q96PB1 797 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 ADAM29Q9UKF5 820 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 PCDHB1Q9Y5F3 818 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 LTBP3Q9NS15 1303 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 FZD6O60353 706 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 KAT7O95251 611 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 AHSGP02765 367 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 SERPINA7P05543 415 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 HGFP14210 728 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 ZNF7P17097 686 aaPredicted RBP6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 ZNF143P52747 638 aaPredicted RBP6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 SEC61A1P61619 476 aaKnown RBP6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 CDO1Q16878 200 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 ARMC12Q5T9G4 340 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 GLT8D1Q68CQ7 371 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 GJB7Q6PEY0 223 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 KIAA1324Q6UXG2 1013 aaKnown RBP6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 UNC93AQ86WB7 457 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 ZDHHC21Q8IVQ6 265 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 CREB3L4Q8TEY5 395 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 UBTD2Q8WUN7 234 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 FOXJ1Q92949 421 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 EGLN2Q96KS0 407 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 PTGES2Q9H7Z7 377 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 CRTAC1Q9NQ79 661 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 TSPAN16Q9UKR8 245 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 KCNK7Q9Y2U2 307 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 STRCP1A6NGW2 1772 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 OR6C6A6NF89 314 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 DRGXA6NNA5 263 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 HAPLN1P10915 354 aaPredicted RBP6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 HSF1Q00613 529 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 ST3GAL4Q11206 333 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 COL9A3Q14050 684 aaPredicted RBP6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 DPYSL3Q14195 570 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 SLC22A6Q4U2R8 563 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 NOL9Q5SY16 702 aaKnown RBP6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 ACSM5Q6NUN0 579 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 TFAP2EQ6VUC0 442 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 BPIFB2Q8N4F0 458 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 C1orf216Q8TAB5 229 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 TOMM40LQ969M1 308 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 CMKLR1Q99788 373 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 SGIP1Q9BQI5 828 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 LRRC3Q9BY71 257 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 ASB7Q9H672 318 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 RPS6KB2Q9UBS0 482 aa6.39□□□□□ -1.39
PDGFRA-201ENST00000257290 STRCQ7RTU9 1775 aa6.38□□□□□ -1.39
PDGFRA-201ENST00000257290 SLC17A3O00476 420 aa6.38□□□□□ -1.39
PDGFRA-201ENST00000257290 SLC16A6O15403 523 aa6.38□□□□□ -1.39
PDGFRA-201ENST00000257290 PRKRAO75569 313 aaKnown RBP6.38□□□□□ -1.39
PDGFRA-201ENST00000257290 DRD5P21918 477 aa6.38□□□□□ -1.39
PDGFRA-201ENST00000257290 ETV4P43268 484 aa6.38□□□□□ -1.39
PDGFRA-201ENST00000257290 NUMBP49757 651 aa6.38□□□□□ -1.39
PDGFRA-201ENST00000257290 CLDN20P56880 219 aa6.38□□□□□ -1.39
PDGFRA-201ENST00000257290 NRG3P56975 720 aa6.38□□□□□ -1.39
PDGFRA-201ENST00000257290 SMIM11AP58511 58 aa6.38□□□□□ -1.39
PDGFRA-201ENST00000257290 LARS2Q15031 903 aaKnown RBP6.38□□□□□ -1.39
PDGFRA-201ENST00000257290 FAM102AQ5T9C2 384 aaPredicted RBP6.38□□□□□ -1.39
PDGFRA-201ENST00000257290 NXNL2Q5VZ03 156 aa6.38□□□□□ -1.39
PDGFRA-201ENST00000257290 C1orf186Q6ZWK4 172 aa6.38□□□□□ -1.39
PDGFRA-201ENST00000257290 SPATA19Q7Z5L4 167 aa6.38□□□□□ -1.39
PDGFRA-201ENST00000257290 MIB2Q96AX9 1013 aa6.38□□□□□ -1.39
PDGFRA-201ENST00000257290 LYSMD1Q96S90 227 aa6.38□□□□□ -1.39
PDGFRA-201ENST00000257290 THAP7Q9BT49 309 aaPredicted RBP6.38□□□□□ -1.39
PDGFRA-201ENST00000257290 AGO3Q9H9G7 860 aaKnown RBP6.38□□□□□ -1.39
PDGFRA-201ENST00000257290 MYOTQ9UBF9 498 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms