RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 OR6C4Q8NGE1 309 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 PFN4Q8NHR9 129 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 GNPDA2Q8TDQ7 276 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 SNAPC3Q92966 411 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 SYNPO2LQ9H987 977 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 PRSS16Q9NQE7 514 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 LOC105369274A0A096LPK9 316 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 MAN2B1O00754 1011 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 AKAP8O43823 692 aaKnown RBP12.63□□□□□ -0.39
VHL-201ENST00000256474 HLA-DPB1P04440 258 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 ZNF888P0CJ79 500 aaPredicted RBP12.63□□□□□ -0.39
VHL-201ENST00000256474 CPEP16870 476 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 GRPRP30550 384 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 COX10Q12887 443 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 OCLNQ16625 522 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 OR4N4Q8N0Y3 316 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 SIRT6Q8N6T7 355 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 TMEM99Q8N816 258 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 MORN4Q8NDC4 146 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 OR8H1Q8NGG4 311 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 CDCP1Q9H5V8 836 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 FBXO34Q9NWN3 711 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 C17orf113A0A1B0GUU1 675 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 INMT-MINDY4F8WBC2 141 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 ACADMP11310 421 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 DMDP11532 3685 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 PVRP15151 417 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 DSG2Q14126 1118 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 GDPGP1Q6ZNW5 385 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 YAF2Q8IY57 180 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 CCL4L1Q8NHW4 92 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 SLC38A1Q9H2H9 487 aa12.63□□□□□ -0.39
VHL-201ENST00000256474 CCDC86Q9H6F5 360 aaKnown RBP12.63□□□□□ -0.39
VHL-201ENST00000256474 PHPT1Q9NRX4 125 aaPredicted RBP12.63□□□□□ -0.39
VHL-201ENST00000256474 H0Y8X5 98 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 NFATC1O95644 943 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 CD3GP09693 182 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 LAMP2P13473 410 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 GSTM3P21266 225 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 PYCR1P32322 319 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 NAA10P41227 235 aaPredicted RBP12.62□□□□□ -0.39
VHL-201ENST00000256474 RAB40BQ12829 278 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 EXOSC7Q15024 291 aaKnown RBP12.62□□□□□ -0.39
VHL-201ENST00000256474 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.62□□□□□ -0.391e-7■□□□□ 9.2
VHL-201ENST00000256474 ZNF542PQ5EBM4 170 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 OR52L1Q8NGH7 329 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 MS4A6EQ96DS6 147 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 CLIP3Q96DZ5 547 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 ABCG5Q9H222 651 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 ENAMQ9NRM1 1142 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 APOBEC3BQ9UH17 382 aaKnown RBP12.62□□□□□ -0.39
VHL-201ENST00000256474 TCF20Q9UGU0 1960 aaKnown RBP12.62□□□□□ -0.39
VHL-201ENST00000256474 FAM171A2A8MVW0 826 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 ELK1P19419 428 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 TRMT12Q53H54 448 aaKnown RBP12.62□□□□□ -0.39
VHL-201ENST00000256474 C1orf94Q6P1W5 598 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 HMGB4Q8WW32 186 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 RFKQ969G6 155 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 TSACCQ96A04 125 aaPredicted RBP12.62□□□□□ -0.39
VHL-201ENST00000256474 SLC35A4Q96G79 324 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 HCAR1Q9BXC0 346 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 IQCMA0A1B0GVH7 501 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 A0A1W2PQU0 124 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 PEX12O00623 359 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 EMC8O43402 210 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 POLR2CP19387 275 aaPredicted RBP12.62□□□□□ -0.39
VHL-201ENST00000256474 DRD5P21918 477 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 ABHD17CQ6PCB6 329 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 GDF7Q7Z4P5 450 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 CEACAM19Q7Z692 300 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 ARL14Q8N4G2 192 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 FBXO15Q8NCQ5 510 aaPredicted RBP12.62□□□□□ -0.39
VHL-201ENST00000256474 OR2T33Q8NG76 320 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 GCDHQ92947 438 aaPredicted RBP12.62□□□□□ -0.39
VHL-201ENST00000256474 ZNF559Q9BR84 538 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 MKRN2Q9H000 416 aaKnown RBP12.62□□□□□ -0.39
VHL-201ENST00000256474 EPHX3Q9H6B9 360 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 SLC6A20Q9NP91 592 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 ZSCAN32Q9NX65 697 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 RASD1Q9Y272 281 aa12.62□□□□□ -0.39
VHL-201ENST00000256474 TBXA2RP21731 343 aa12.61□□□□□ -0.39
VHL-201ENST00000256474 CDK5Q00535 292 aa12.61□□□□□ -0.39
VHL-201ENST00000256474 ENPP7Q6UWV6 458 aa12.61□□□□□ -0.39
VHL-201ENST00000256474 PEX5LQ8IYB4 626 aa12.61□□□□□ -0.39
VHL-201ENST00000256474 ZNF433Q8N7K0 673 aaPredicted RBP12.61□□□□□ -0.39
VHL-201ENST00000256474 GDPD1Q8N9F7 314 aa12.61□□□□□ -0.39
VHL-201ENST00000256474 OR7G2Q8NG99 324 aa12.61□□□□□ -0.39
VHL-201ENST00000256474 OR13C2Q8NGS9 318 aa12.61□□□□□ -0.39
VHL-201ENST00000256474 SETD6Q8TBK2 473 aa12.61□□□□□ -0.39
VHL-201ENST00000256474 DEDD2Q8WXF8 326 aa12.61□□□□□ -0.39
VHL-201ENST00000256474 ELP4Q96EB1 424 aa12.61□□□□□ -0.39
VHL-201ENST00000256474 KXD1Q9BQD3 176 aa12.61□□□□□ -0.39
VHL-201ENST00000256474 ALG8Q9BVK2 526 aa12.61□□□□□ -0.39
VHL-201ENST00000256474 PELI2Q9HAT8 420 aa12.61□□□□□ -0.39
VHL-201ENST00000256474 ACSS1Q9NUB1 689 aaPredicted RBP12.61□□□□□ -0.39
VHL-201ENST00000256474 C20orf141Q9NUB4 165 aa12.61□□□□□ -0.39
VHL-201ENST00000256474 NLGN3Q9NZ94 848 aa12.61□□□□□ -0.39
VHL-201ENST00000256474 CHST2Q9Y4C5 530 aa12.61□□□□□ -0.39
VHL-201ENST00000256474 E9PI62 339 aa12.61□□□□□ -0.39
VHL-201ENST00000256474 E9PQ18 207 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms