RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 PADI1Q9ULC6 663 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 TESMINQ9Y4I5 508 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 PCDHGA10Q9Y5H3 936 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 LOC102723996A0A087X1L8 192 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 CLDN24A6NM45 220 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 TNFRSF11BO00300 401 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 PCDH17O14917 1159 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 DENRO43583 198 aaKnown RBP8.74□□□□□ -1.01
NIP7-202ENST00000254941 UMODP07911 640 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 CCNYL3P0C7X3 344 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 FTH1P19P0C7X4 201 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 PRKACGP22612 351 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 LIMS1P48059 325 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 RFX3P48380 749 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 SPIBQ01892 262 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 DECR1Q16698 335 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 LIN52Q52LA3 116 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 EIPR1Q53HC9 387 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 PAPD4Q6PIY7 484 aaKnown RBP8.74□□□□□ -1.01
NIP7-202ENST00000254941 C6orf15Q6UXA7 325 aaPredicted RBP8.74□□□□□ -1.01
NIP7-202ENST00000254941 DEF8Q6ZN54 512 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 ZNF836Q6ZNA1 936 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 SLC29A4Q7RTT9 530 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 TIPARPQ7Z3E1 657 aaKnown RBP8.74□□□□□ -1.01
NIP7-202ENST00000254941 CYP4Z1Q86W10 505 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 OR4C15Q8NGM1 316 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 OR2Y1Q8NGV0 311 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 DHRS1Q96LJ7 313 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 ZNF570Q96NI8 536 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 RDH12Q96NR8 316 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 WWTR1Q9GZV5 400 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 NMNAT1Q9HAN9 279 aaPredicted RBP8.74□□□□□ -1.01
NIP7-202ENST00000254941 SMPD3Q9NY59 655 aaPredicted RBP8.74□□□□□ -1.01
NIP7-202ENST00000254941 A4GNTQ9UNA3 340 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 PTRH2Q9Y3E5 179 aaKnown RBP8.74□□□□□ -1.01
NIP7-202ENST00000254941 AP4B1Q9Y6B7 739 aa8.74□□□□□ -1.01
NIP7-202ENST00000254941 NPIPA5A0A0B4J1W7 369 aa8.73□□□□□ -1.01
NIP7-202ENST00000254941 CDHR4A6H8M9 788 aa8.73□□□□□ -1.01
NIP7-202ENST00000254941 NPIPA7E9PJI5 369 aa8.73□□□□□ -1.01
NIP7-202ENST00000254941 TM4SF5O14894 197 aa8.73□□□□□ -1.01
NIP7-202ENST00000254941 TO15178 435 aa8.73□□□□□ -1.01
NIP7-202ENST00000254941 GADD45GO95257 159 aa8.73□□□□□ -1.01
NIP7-202ENST00000254941 IL33O95760 270 aa8.73□□□□□ -1.01
NIP7-202ENST00000254941 NPIPA8P0DM63 369 aa8.73□□□□□ -1.01
NIP7-202ENST00000254941 CSRP1P21291 193 aaKnown RBP8.73□□□□□ -1.01
NIP7-202ENST00000254941 ATP12AP54707 1039 aa8.73□□□□□ -1.01
NIP7-202ENST00000254941 CDH12P55289 794 aa8.73□□□□□ -1.01
NIP7-202ENST00000254941 GANABQ14697 944 aaKnown RBP8.73□□□□□ -1.01
NIP7-202ENST00000254941 LAPTM4AQ15012 233 aa8.73□□□□□ -1.01
NIP7-202ENST00000254941 NPTX1Q15818 432 aa8.73□□□□□ -1.01
NIP7-202ENST00000254941 ZNF141Q15928 474 aa8.73□□□□□ -1.01
NIP7-202ENST00000254941 C3orf38Q5JPI3 329 aa8.73□□□□□ -1.01
NIP7-202ENST00000254941 COLEC12Q5KU26 742 aa8.73□□□□□ -1.01
NIP7-202ENST00000254941 C6orf52Q5T4I8 152 aa8.73□□□□□ -1.01
NIP7-202ENST00000254941 MRPL2Q5T653 305 aaKnown RBP8.73□□□□□ -1.01
NIP7-202ENST00000254941 FAM69BQ5VUD6 431 aa8.73□□□□□ -1.01
NIP7-202ENST00000254941 HLA-DQA1Q5Y7H0 255 aa8.73□□□□□ -1.01
NIP7-202ENST00000254941 ZNF441Q8N8Z8 693 aa8.73□□□□□ -1.01
NIP7-202ENST00000254941 PHF10Q8WUB8 498 aaKnown RBP8.73□□□□□ -1.01
NIP7-202ENST00000254941 OIT3Q8WWZ8 545 aa8.73□□□□□ -1.01
NIP7-202ENST00000254941 GAL3ST4Q96RP7 486 aa8.73□□□□□ -1.01
NIP7-202ENST00000254941 LMF1Q96S06 567 aa8.73□□□□□ -1.01
NIP7-202ENST00000254941 BARD1Q99728 777 aaKnown RBP8.73□□□□□ -1.01
NIP7-202ENST00000254941 B3GNT4Q9C0J1 378 aa8.73□□□□□ -1.01
NIP7-202ENST00000254941 Q9H521 79 aa8.73□□□□□ -1.01
NIP7-202ENST00000254941 ARMC7Q9H6L4 198 aa8.73□□□□□ -1.01
NIP7-202ENST00000254941 SMURF2Q9HAU4 748 aa8.73□□□□□ -1.01
NIP7-202ENST00000254941 PDP1Q9P0J1 537 aaPredicted RBP8.73□□□□□ -1.01
NIP7-202ENST00000254941 TMEFF2Q9UIK5 374 aaPredicted RBP8.73□□□□□ -1.01
NIP7-202ENST00000254941 ZNF223Q9UK11 482 aaPredicted RBP8.73□□□□□ -1.01
NIP7-202ENST00000254941 PCNX3Q9H6A9 2034 aa8.73□□□□□ -1.01
NIP7-202ENST00000254941 DOCK10Q96BY6 2186 aa8.73□□□□□ -1.01
NIP7-202ENST00000254941 SPAARA0A1B0GVQ0 90 aa8.72□□□□□ -1.01
NIP7-202ENST00000254941 FRS3O43559 492 aa8.72□□□□□ -1.01
NIP7-202ENST00000254941 PRKNO60260 465 aaPredicted RBP8.72□□□□□ -1.01
NIP7-202ENST00000254941 TPST2O60704 377 aa8.72□□□□□ -1.01
NIP7-202ENST00000254941 SEC24DO94855 1032 aaPredicted RBP8.72□□□□□ -1.01
NIP7-202ENST00000254941 RAB40ALP0C0E4 278 aa8.72□□□□□ -1.01
NIP7-202ENST00000254941 FUT4P22083 530 aa8.72□□□□□ -1.01
NIP7-202ENST00000254941 PSMD4P55036 377 aaKnown RBP8.72□□□□□ -1.01
NIP7-202ENST00000254941 RGS8P57771 180 aaPredicted RBP8.72□□□□□ -1.01
NIP7-202ENST00000254941 SLC26A5P58743 744 aa8.72□□□□□ -1.01
NIP7-202ENST00000254941 RNF4P78317 190 aa8.72□□□□□ -1.01
NIP7-202ENST00000254941 PSPHP78330 225 aa8.72□□□□□ -1.01
NIP7-202ENST00000254941 TARDBPQ13148 414 aaKnown RBP eCLIP8.72□□□□□ -1.01
NIP7-202ENST00000254941 MED21Q13503 144 aa8.72□□□□□ -1.01
NIP7-202ENST00000254941 PIN1Q13526 163 aaPredicted RBP8.72□□□□□ -1.01
NIP7-202ENST00000254941 ZSWIM7Q19AV6 140 aa8.72□□□□□ -1.01
NIP7-202ENST00000254941 MICAQ29983 383 aa8.72□□□□□ -1.01
NIP7-202ENST00000254941 PDZK1Q5T2W1 519 aa8.72□□□□□ -1.01
NIP7-202ENST00000254941 KDM4DQ6B0I6 523 aa8.72□□□□□ -1.01
NIP7-202ENST00000254941 FAHD1Q6P587 224 aa8.72□□□□□ -1.01
NIP7-202ENST00000254941 HSDL2Q6YN16 418 aa8.72□□□□□ -1.01
NIP7-202ENST00000254941 TSPYL5Q86VY4 417 aaPredicted RBP8.72□□□□□ -1.01
NIP7-202ENST00000254941 GRAMD2AQ8IUY3 354 aa8.72□□□□□ -1.01
NIP7-202ENST00000254941 OR4C3Q8NH37 302 aa8.72□□□□□ -1.01
NIP7-202ENST00000254941 OR8K3Q8NH51 312 aa8.72□□□□□ -1.01
NIP7-202ENST00000254941 OR52J3Q8NH60 311 aa8.72□□□□□ -1.01
NIP7-202ENST00000254941 NUBPLQ8TB37 319 aa8.72□□□□□ -1.01
NIP7-202ENST00000254941 NR4A3Q92570 626 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms