RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 AMER2Q8N7J2 671 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 RHBDD1Q8TEB9 315 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 ARHGDIGQ99819 225 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 RHNO1Q9BSD3 238 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 MKL2Q9ULH7 1088 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 SRPK3Q9UPE1 567 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 GMPPBQ9Y5P6 360 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 GPR179Q6PRD1 2367 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 NTN3O00634 580 aaPredicted RBP17.52■□□□□ 0.4
TRIM47-201ENST00000254816 IGKV1D-16P01601 117 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 H1F0P07305 194 aaKnown RBP17.52■□□□□ 0.4
TRIM47-201ENST00000254816 ELAVL4P26378 380 aaKnown RBP17.52■□□□□ 0.4
TRIM47-201ENST00000254816 PRKAR1BP31321 381 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 GRK6P43250 576 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 ZNHIT3Q15649 155 aaPredicted RBP17.52■□□□□ 0.4
TRIM47-201ENST00000254816 SMN1Q16637 294 aaKnown RBP17.52■□□□□ 0.4
TRIM47-201ENST00000254816 PLA2G2CQ5R387 149 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 ZNF615Q8N8J6 731 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 B4GALNT2Q8NHY0 566 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 TBC1D15Q8TC07 691 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 FBLIM1Q8WUP2 373 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 ITPAQ9BY32 194 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 ERVK-18Q9QC07 812 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 ACAD8Q9UKU7 415 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 NTNG1Q9Y2I2 539 aa17.52■□□□□ 0.4
TRIM47-201ENST00000254816 TRIM64BA6NI03 449 aa17.51■□□□□ 0.39
TRIM47-201ENST00000254816 AGAP5A6NIR3 686 aa17.51■□□□□ 0.39
TRIM47-201ENST00000254816 PCMT1P22061 227 aa17.51■□□□□ 0.39
TRIM47-201ENST00000254816 TUBA3CQ13748 450 aa17.51■□□□□ 0.39
TRIM47-201ENST00000254816 FAAH2Q6GMR7 532 aa17.51■□□□□ 0.39
TRIM47-201ENST00000254816 UBE2FQ969M7 185 aa17.51■□□□□ 0.39
TRIM47-201ENST00000254816 MUL1Q969V5 352 aa17.51■□□□□ 0.39
TRIM47-201ENST00000254816 GTPBP3Q969Y2 492 aaKnown RBP17.51■□□□□ 0.39
TRIM47-201ENST00000254816 HSPBAP1Q96EW2 488 aa17.51■□□□□ 0.39
TRIM47-201ENST00000254816 SENP5Q96HI0 755 aaPredicted RBP17.51■□□□□ 0.39
TRIM47-201ENST00000254816 LOXL4Q96JB6 756 aa17.51■□□□□ 0.39
TRIM47-201ENST00000254816 VN1R1Q9GZP7 353 aa17.51■□□□□ 0.39
TRIM47-201ENST00000254816 SAP130Q9H0E3 1048 aa17.51■□□□□ 0.39
TRIM47-201ENST00000254816 IFT52Q9Y366 437 aa17.51■□□□□ 0.39
TRIM47-201ENST00000254816 COL5A1P20908 1838 aaPredicted RBP17.51■□□□□ 0.39
TRIM47-201ENST00000254816 EFCAB7A8K855 629 aa17.51■□□□□ 0.39
TRIM47-201ENST00000254816 SYT5O00445 386 aa17.51■□□□□ 0.39
TRIM47-201ENST00000254816 KIAA0513O60268 411 aa17.51■□□□□ 0.39
TRIM47-201ENST00000254816 BRINP1O60477 761 aa17.51■□□□□ 0.39
TRIM47-201ENST00000254816 UGT2B17O75795 530 aa17.51■□□□□ 0.39
TRIM47-201ENST00000254816 GSSP48637 474 aa17.51■□□□□ 0.39
TRIM47-201ENST00000254816 GP2P55259 537 aaKnown RBP17.51■□□□□ 0.39
TRIM47-201ENST00000254816 SF3A2Q15428 464 aaKnown RBP17.51■□□□□ 0.39
TRIM47-201ENST00000254816 NSDHLQ15738 373 aa17.51■□□□□ 0.39
TRIM47-201ENST00000254816 Q6ZPB1 254 aaPredicted RBP17.51■□□□□ 0.39
TRIM47-201ENST00000254816 MED25Q71SY5 747 aa17.51■□□□□ 0.39
TRIM47-201ENST00000254816 AQP11Q8NBQ7 271 aa17.51■□□□□ 0.39
TRIM47-201ENST00000254816 DHRS1Q96LJ7 313 aa17.51■□□□□ 0.39
TRIM47-201ENST00000254816 PELOQ9BRX2 385 aaKnown RBP17.51■□□□□ 0.39
TRIM47-201ENST00000254816 FUNDC2Q9BWH2 189 aa17.51■□□□□ 0.39
TRIM47-201ENST00000254816 OR8D2Q9GZM6 311 aa17.51■□□□□ 0.39
TRIM47-201ENST00000254816 TRIM45Q9H8W5 580 aaPredicted RBP17.51■□□□□ 0.39
TRIM47-201ENST00000254816 MKKSQ9NPJ1 570 aaPredicted RBP17.51■□□□□ 0.39
TRIM47-201ENST00000254816 ZNF232Q9UNY5 417 aa17.51■□□□□ 0.39
TRIM47-201ENST00000254816 HCN4Q9Y3Q4 1203 aa17.51■□□□□ 0.39
TRIM47-201ENST00000254816 PCDHGA5Q9Y5G8 931 aa17.51■□□□□ 0.39
TRIM47-201ENST00000254816 COL27A1Q8IZC6 1860 aaPredicted RBP17.5■□□□□ 0.39
TRIM47-201ENST00000254816 CPSF4LA6NMK7 179 aaKnown RBP17.5■□□□□ 0.39
TRIM47-201ENST00000254816 GASTP01350 101 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 CT45A8P0DMV1 189 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 CT45A9P0DMV2 189 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 TRHRP34981 398 aaPredicted RBP17.5■□□□□ 0.39
TRIM47-201ENST00000254816 MAP2K4P45985 399 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 EEF1A1P68104 462 aaKnown RBP17.5■□□□□ 0.39
TRIM47-201ENST00000254816 LARS2Q15031 903 aaKnown RBP17.5■□□□□ 0.39
TRIM47-201ENST00000254816 CT45A2Q5DJT8 189 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 DCST1Q5T197 706 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 PPP1R3BQ86XI6 285 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 SETD9Q8NE22 299 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 FNDC11Q9BVV2 318 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 CACYBPQ9HB71 228 aaKnown RBP17.5■□□□□ 0.39
TRIM47-201ENST00000254816 RASSF1Q9NS23 344 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 TCRBV16S1A1N1A0A5B0 115 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 CCDC159P0C7I6 412 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 ANXA8P13928 327 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 RPS4Y1P22090 263 aaKnown RBP17.5■□□□□ 0.39
TRIM47-201ENST00000254816 CSTF2P33240 577 aaKnown RBP eCLIP17.5■□□□□ 0.39
TRIM47-201ENST00000254816 GALNSP34059 522 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 RGS8P57771 180 aaPredicted RBP17.5■□□□□ 0.39
TRIM47-201ENST00000254816 NPRL3Q12980 569 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 KEAP1Q14145 624 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 ANKDD1AQ495B1 522 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 FLYWCH1Q4VC44 716 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 DBX2Q6ZNG2 339 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 LANCL3Q6ZV70 420 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 CCDC71Q8IV32 467 aaPredicted RBP17.5■□□□□ 0.39
TRIM47-201ENST00000254816 SLC7A13Q8TCU3 470 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 RAB2BQ8WUD1 216 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 ARSGQ96EG1 525 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 PRRC1Q96M27 445 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 ZNF578Q96N58 590 aaPredicted RBP17.5■□□□□ 0.39
TRIM47-201ENST00000254816 PLGRKTQ9HBL7 147 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 RXFP3Q9NSD7 469 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 MAN2C1Q9NTJ4 1040 aa17.5■□□□□ 0.39
TRIM47-201ENST00000254816 KLHL28Q9NXS3 571 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms