RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 LRRC32Q14392 662 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 C2orf76Q3KRA6 126 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 ACSM3Q53FZ2 586 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 COX15Q7KZN9 410 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 LAX1Q8IWV1 398 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 OR5AK2Q8NH90 309 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 SCLYQ96I15 445 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 GPR52Q9Y2T5 361 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 C10orf71Q711Q0 1435 aa12.47□□□□□ -0.41
PCDHGA3-201ENST00000253812 METTL15A6NJ78 407 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 H7C1Q1 480 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 APOA2P02652 100 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 TCRBP04435 133 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 RPS17P08708 135 aaKnown RBP12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 ZNF26P17031 533 aaPredicted RBP12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 RSU1Q15404 277 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 PLPP4Q5VZY2 271 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 ZC3H14Q6PJT7 736 aaKnown RBP12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 KDELC1Q6UW63 502 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 HIST2H3AQ71DI3 136 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 AKR7LQ8NHP1 331 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 DUSP19Q8WTR2 217 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 MAP6Q96JE9 813 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 FYTTD1Q96QD9 318 aaKnown RBP12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 WRAP53Q9BUR4 548 aaKnown RBP12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 SRMSQ9H3Y6 488 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 SLC45A1Q9Y2W3 748 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 HEBP2Q9Y5Z4 205 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 RNF215Q9Y6U7 377 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 URB1O60287 2271 aaKnown RBP12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 SOCS7O14512 581 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 HRGP04196 525 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 HLA-DMAP28067 261 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 HOXC12P31275 282 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 ZNF84P51523 738 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 CLPPQ16740 277 aaPredicted RBP12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 KIAA1324Q6UXG2 1013 aaKnown RBP12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 CMIPQ8IY22 773 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 CLRN3Q8NCR9 226 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 OR6N1Q8NGY5 312 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 LINC01599Q8WXQ3 324 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 L3HYPDHQ96EM0 354 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 GAREM1Q9H706 876 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 NUP188Q5SRE5 1749 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 SLC22A23A1A5C7 686 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 D6RAR5 112 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 G3V2L1 256 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 VIPR1P32241 457 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 SH3BP2P78314 561 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 LRIF1Q5T3J3 769 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 LYPD4Q6UWN0 246 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 ABHD13Q7L211 337 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 OR9Q2Q8NGE9 314 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 OR52N2Q8NGI0 321 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 OR10R2Q8NGX6 335 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 GGHQ92820 318 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 ZNF300Q96RE9 604 aaPredicted RBP12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 SMIM3Q9BZL3 60 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 ADAM19Q9H013 955 aa12.46□□□□□ -0.41
PCDHGA3-201ENST00000253812 TBC1D3DA0A087WVF3 549 aa12.46□□□□□ -0.42
PCDHGA3-201ENST00000253812 TBC1D3IA0A087WXS9 549 aa12.46□□□□□ -0.42
PCDHGA3-201ENST00000253812 TBC1D3EA0A087X179 549 aa12.46□□□□□ -0.42
PCDHGA3-201ENST00000253812 TBC1D3KA0A087X1G2 549 aa12.46□□□□□ -0.42
PCDHGA3-201ENST00000253812 TBC1D3FA6NER0 549 aaPredicted RBP12.46□□□□□ -0.42
PCDHGA3-201ENST00000253812 TBC1D3LB9A6J9 549 aa12.46□□□□□ -0.42
PCDHGA3-201ENST00000253812 ZNF780AO75290 641 aaPredicted RBP12.46□□□□□ -0.42
PCDHGA3-201ENST00000253812 SNAI1O95863 264 aaPredicted RBP12.46□□□□□ -0.42
PCDHGA3-201ENST00000253812 TBC1D3HP0C7X1 549 aa12.46□□□□□ -0.42
PCDHGA3-201ENST00000253812 GP1BBP13224 206 aa12.46□□□□□ -0.42
PCDHGA3-201ENST00000253812 ATP1B2P14415 290 aaPredicted RBP12.46□□□□□ -0.42
PCDHGA3-201ENST00000253812 CPT2P23786 658 aa12.46□□□□□ -0.42
PCDHGA3-201ENST00000253812 POLR2HP52434 150 aaKnown RBP12.46□□□□□ -0.42
PCDHGA3-201ENST00000253812 SELENOWP63302 87 aa12.46□□□□□ -0.42
PCDHGA3-201ENST00000253812 DECR1Q16698 335 aa12.46□□□□□ -0.42
PCDHGA3-201ENST00000253812 PAGE3Q5JUK9 113 aa12.46□□□□□ -0.42
PCDHGA3-201ENST00000253812 FAM182AQ5T1J6 154 aa12.46□□□□□ -0.42
PCDHGA3-201ENST00000253812 C1QTNF12Q5T7M4 302 aa12.46□□□□□ -0.42
PCDHGA3-201ENST00000253812 TBC1D3GQ6DHY5 549 aa12.46□□□□□ -0.42
PCDHGA3-201ENST00000253812 TBC1D3CQ6IPX1 549 aa12.46□□□□□ -0.42
PCDHGA3-201ENST00000253812 SPRED1Q7Z699 444 aa12.46□□□□□ -0.42
PCDHGA3-201ENST00000253812 TBC1D3Q8IZP1 549 aaPredicted RBP12.46□□□□□ -0.42
PCDHGA3-201ENST00000253812 ZSCAN4Q8NAM6 433 aaPredicted RBP12.46□□□□□ -0.42
PCDHGA3-201ENST00000253812 TRIB3Q96RU7 358 aa12.46□□□□□ -0.42
PCDHGA3-201ENST00000253812 SLC25A31Q9H0C2 315 aa12.46□□□□□ -0.42
PCDHGA3-201ENST00000253812 OR2AG1Q9H205 316 aa12.46□□□□□ -0.42
PCDHGA3-201ENST00000253812 SPHK1Q9NYA1 384 aa12.46□□□□□ -0.42
PCDHGA3-201ENST00000253812 KCTD3Q9Y597 815 aa12.46□□□□□ -0.42
PCDHGA3-201ENST00000253812 H3BUI4 141 aa12.45□□□□□ -0.42
PCDHGA3-201ENST00000253812 SOX1O00570 391 aaPredicted RBP12.45□□□□□ -0.42
PCDHGA3-201ENST00000253812 RAF1P04049 648 aa12.45□□□□□ -0.42
PCDHGA3-201ENST00000253812 FGF4P08620 206 aa12.45□□□□□ -0.42
PCDHGA3-201ENST00000253812 APEX1P27695 318 aaKnown RBP12.45□□□□□ -0.42
PCDHGA3-201ENST00000253812 SHMT2P34897 504 aa12.45□□□□□ -0.42
PCDHGA3-201ENST00000253812 MLIPQ5VWP3 458 aa12.45□□□□□ -0.42
PCDHGA3-201ENST00000253812 VASNQ6EMK4 673 aa12.45□□□□□ -0.42
PCDHGA3-201ENST00000253812 SLC46A3Q7Z3Q1 461 aa12.45□□□□□ -0.42
PCDHGA3-201ENST00000253812 TMEM102Q8N9M5 508 aaPredicted RBP12.45□□□□□ -0.42
PCDHGA3-201ENST00000253812 ACTRT3Q9BYD9 372 aa12.45□□□□□ -0.42
PCDHGA3-201ENST00000253812 EXO1Q9UQ84 846 aaKnown RBP12.45□□□□□ -0.42
PCDHGA3-201ENST00000253812 ALS2Q96Q42 1657 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms