RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 ZNF630Q2M218 657 aaPredicted RBP11.61□□□□□ -0.55
VPREB3-201ENST00000248948 ACSF3Q4G176 576 aaPredicted RBP11.61□□□□□ -0.55
VPREB3-201ENST00000248948 CRYBG3Q68DQ2 2970 aa11.61□□□□□ -0.55
VPREB3-201ENST00000248948 RTL6Q6ICC9 239 aa11.61□□□□□ -0.55
VPREB3-201ENST00000248948 AAGABQ6PD74 315 aa11.61□□□□□ -0.55
VPREB3-201ENST00000248948 FIGNL1Q6PIW4 674 aa11.61□□□□□ -0.55
VPREB3-201ENST00000248948 ENPP6Q6UWR7 440 aa11.61□□□□□ -0.55
VPREB3-201ENST00000248948 NCCRP1Q6ZVX7 275 aaPredicted RBP11.61□□□□□ -0.55
VPREB3-201ENST00000248948 RPRMLQ8N4K4 120 aa11.61□□□□□ -0.55
VPREB3-201ENST00000248948 OR2M3Q8NG83 312 aa11.61□□□□□ -0.55
VPREB3-201ENST00000248948 OR4A15Q8NGL6 344 aa11.61□□□□□ -0.55
VPREB3-201ENST00000248948 OR5AK3PQ8NH89 298 aa11.61□□□□□ -0.55
VPREB3-201ENST00000248948 MIPOL1Q8TD10 442 aa11.61□□□□□ -0.55
VPREB3-201ENST00000248948 NUDT8Q8WV74 236 aa11.61□□□□□ -0.55
VPREB3-201ENST00000248948 STON2Q8WXE9 905 aa11.61□□□□□ -0.55
VPREB3-201ENST00000248948 CDS1Q92903 461 aa11.61□□□□□ -0.55
VPREB3-201ENST00000248948 SDCCAG3Q96C92 435 aa11.61□□□□□ -0.55
VPREB3-201ENST00000248948 SLC35G5Q96KT7 338 aa11.61□□□□□ -0.55
VPREB3-201ENST00000248948 CCDC115Q96NT0 180 aa11.61□□□□□ -0.55
VPREB3-201ENST00000248948 ZBTB18Q99592 522 aa11.61□□□□□ -0.55
VPREB3-201ENST00000248948 TIMP4Q99727 224 aa11.61□□□□□ -0.55
VPREB3-201ENST00000248948 TTYH2Q9BSA4 534 aa11.61□□□□□ -0.55
VPREB3-201ENST00000248948 UGT2B28Q9BY64 529 aa11.61□□□□□ -0.55
VPREB3-201ENST00000248948 PTGES2Q9H7Z7 377 aa11.61□□□□□ -0.55
VPREB3-201ENST00000248948 CHST11Q9NPF2 352 aa11.61□□□□□ -0.55
VPREB3-201ENST00000248948 SDR39U1Q9NRG7 319 aaPredicted RBP11.61□□□□□ -0.55
VPREB3-201ENST00000248948 INTS9Q9NV88 658 aaKnown RBP11.61□□□□□ -0.55
VPREB3-201ENST00000248948 BTNL2Q9UIR0 455 aa11.61□□□□□ -0.55
VPREB3-201ENST00000248948 SLC6A5Q9Y345 797 aa11.61□□□□□ -0.55
VPREB3-201ENST00000248948 USH1CQ9Y6N9 552 aa11.61□□□□□ -0.55
VPREB3-201ENST00000248948 PCNX3Q9H6A9 2034 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 MED12Q93074 2177 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 KIAA1549Q9HCM3 1950 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 DUXAA6NLW8 204 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 SCDO00767 359 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 TGDSO95455 350 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 ANGPTL1O95841 491 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 AGR2O95994 175 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 PGRP06401 933 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 GLI4P10075 376 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 CPN1P15169 458 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 BMP7P18075 431 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 ATP6V1C1P21283 382 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 UQCRC2P22695 453 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 CHMP24386 653 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 DPP4P27487 766 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 S100A3P33764 101 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 DCTP40126 519 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 MRPL19P49406 292 aaKnown RBP11.6□□□□□ -0.55
VPREB3-201ENST00000248948 UFM1P61960 85 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 TXNL4AP83876 142 aaKnown RBP11.6□□□□□ -0.55
VPREB3-201ENST00000248948 STX5Q13190 355 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 SLC9B1Q4ZJI4 515 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 DCST1Q5T197 706 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 DCST2Q5T1A1 773 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 RIPPLY2Q5TAB7 128 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 NXNQ6DKJ4 435 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 EPGNQ6UW88 154 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 MSANTD1Q6ZTZ1 278 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 YRDCQ86U90 279 aaKnown RBP11.6□□□□□ -0.55
VPREB3-201ENST00000248948 ANKRD46Q86W74 232 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 LACC1Q8IV20 430 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 TRIML2Q8N7C3 387 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 ZNF527Q8NB42 609 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 GOT1L1Q8NHS2 421 aaPredicted RBP11.6□□□□□ -0.55
VPREB3-201ENST00000248948 CA5BP1Q8WTZ4 195 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 OIT3Q8WWZ8 545 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 ABTB1Q969K4 478 aaPredicted RBP11.6□□□□□ -0.55
VPREB3-201ENST00000248948 OTUB1Q96FW1 271 aaPredicted RBP11.6□□□□□ -0.55
VPREB3-201ENST00000248948 CHMP6Q96FZ7 201 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 TEX37Q96LM6 180 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 SFXN2Q96NB2 322 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 OR7D2Q96RA2 312 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 YIPF4Q9BSR8 244 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 RTN4RQ9BZR6 473 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 SERHL2Q9H4I8 314 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 UBQLN4Q9NRR5 601 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 ZIM2Q9NZV7 527 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 RNF6Q9Y252 685 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 NAV2Q8IVL1 2488 aa11.6□□□□□ -0.55
VPREB3-201ENST00000248948 CD8B2A6NJW9 211 aa11.59□□□□□ -0.55
VPREB3-201ENST00000248948 LINC01387J3KSC0 135 aa11.59□□□□□ -0.55
VPREB3-201ENST00000248948 POLR3GO15318 223 aaPredicted RBP11.59□□□□□ -0.55
VPREB3-201ENST00000248948 NDUFB5O43674 189 aa11.59□□□□□ -0.55
VPREB3-201ENST00000248948 DIAPH2O60879 1101 aa11.59□□□□□ -0.55
VPREB3-201ENST00000248948 IL6P05231 212 aa11.59□□□□□ -0.55
VPREB3-201ENST00000248948 GUSBP08236 651 aa11.59□□□□□ -0.55
VPREB3-201ENST00000248948 HPGDP15428 266 aa11.59□□□□□ -0.55
VPREB3-201ENST00000248948 ZNF17P17021 662 aa11.59□□□□□ -0.55
VPREB3-201ENST00000248948 MSX1P28360 303 aa11.59□□□□□ -0.55
VPREB3-201ENST00000248948 HTR1EP28566 365 aa11.59□□□□□ -0.55
VPREB3-201ENST00000248948 KHKP50053 298 aa11.59□□□□□ -0.55
VPREB3-201ENST00000248948 PHC1P78364 1004 aa11.59□□□□□ -0.55
VPREB3-201ENST00000248948 IRX1P78414 480 aaPredicted RBP11.59□□□□□ -0.55
VPREB3-201ENST00000248948 PMPCAQ10713 525 aa11.59□□□□□ -0.55
VPREB3-201ENST00000248948 RCAN2Q14206 197 aa11.59□□□□□ -0.55
VPREB3-201ENST00000248948 CCNJQ5T5M9 372 aa11.59□□□□□ -0.55
VPREB3-201ENST00000248948 SAXO2Q658L1 398 aa11.59□□□□□ -0.55
VPREB3-201ENST00000248948 OR5M10Q6IEU7 315 aa11.59□□□□□ -0.55
VPREB3-201ENST00000248948 MTERF4Q7Z6M4 381 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms