RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 TPD52P55327 224 aaPredicted RBP17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 MAPK14Q16539 360 aa17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 RNF220Q5VTB9 566 aa17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 GALNT5Q7Z7M9 940 aa17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 RANBP3LQ86VV4 465 aaPredicted RBP17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 CHERPQ8IWX8 916 aaKnown RBP17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 FAM122AQ96E09 287 aa17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 LIN37Q96GY3 246 aaPredicted RBP17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 SPSB2Q99619 263 aa17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 PISDQ9UG56 409 aa17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 ACAD8Q9UKU7 415 aa17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 A4GNTQ9UNA3 340 aa17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 B3GALT1Q9Y5Z6 326 aa17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 NUP210LQ5VU65 1888 aa17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 PCDH17O14917 1159 aa17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 FRS3O43559 492 aa17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 IGKV1D-16P01601 117 aa17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 KRT20P35900 424 aa17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 ATP12AP54707 1039 aa17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 FOXL2P58012 376 aa17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 ZSWIM7Q19AV6 140 aa17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 PDZK1Q5T2W1 519 aa17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 MRPL2Q5T653 305 aaKnown RBP17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 CDCP2Q5VXM1 449 aa17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 ANKRD34AQ69YU3 496 aa17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 FAHD1Q6P587 224 aa17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 FAM199XQ6PEV8 388 aaPredicted RBP17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 GALNT6Q8NCL4 622 aa17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 FEVQ99581 238 aa17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 LPAR4Q99677 370 aa17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 HOXD1Q9GZZ0 328 aa17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 FAM118AQ9NWS6 357 aa17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 TMEFF2Q9UIK5 374 aaPredicted RBP17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 PCDHGA10Q9Y5H3 936 aa17.32■□□□□ 0.36
TNFSF9-201ENST00000245817 PCNX2A6NKB5 2137 aa17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 IGHV3-20A0A0C4DH32 117 aa17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 SAGE2PA6NJ88 616 aa17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 CLDN24A6NM45 220 aa17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 FAAHO00519 579 aa17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 UGT2B11O75310 529 aa17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 OXSR1O95747 527 aaPredicted RBP17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 CD63P08962 238 aa17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 HPGDP15428 266 aa17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 MYF6P23409 242 aa17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 LIMS1P48059 325 aa17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 ADARB1P78563 741 aaKnown RBP17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 ST3GAL3Q11203 375 aa17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 KCNAB2Q13303 367 aa17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 EIF3IQ13347 325 aaKnown RBP17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 EBPQ15125 230 aaKnown RBP17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 TMEM164Q5U3C3 297 aa17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 PLEKHM3Q6ZWE6 761 aa17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 CPEB2Q7Z5Q1 589 aaKnown RBP17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 ZAR1Q86SH2 424 aa17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 OFCC1Q8IZS5 231 aa17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 SLC5A8Q8N695 610 aa17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 B3GNT7Q8NFL0 401 aa17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 GATA6Q92908 595 aa17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 PMEPA1Q969W9 287 aa17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 ADIPOR1Q96A54 375 aa17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 DHRS1Q96LJ7 313 aa17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 MCHR1Q99705 422 aa17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 NXF5Q9H1B4 397 aaKnown RBP17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 RIBC2Q9H4K1 309 aa17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 AKIRIN1Q9H9L7 192 aaPredicted RBP17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 UBAP1Q9NZ09 502 aa17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 KCNE5Q9UJ90 142 aa17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 CHST2Q9Y4C5 530 aa17.31■□□□□ 0.36
TNFSF9-201ENST00000245817 CCDC187A0A096LP49 1063 aa17.3■□□□□ 0.36
TNFSF9-201ENST00000245817 CENPVL1A0A0U1RR11 272 aa17.3■□□□□ 0.36
TNFSF9-201ENST00000245817 A0A1W2PRQ8 180 aa17.3■□□□□ 0.36
TNFSF9-201ENST00000245817 CDHR4A6H8M9 788 aa17.3■□□□□ 0.36
TNFSF9-201ENST00000245817 ARRDC5A6NEK1 342 aa17.3■□□□□ 0.36
TNFSF9-201ENST00000245817 CPSF4LA6NMK7 179 aaKnown RBP17.3■□□□□ 0.36
TNFSF9-201ENST00000245817 TPST2O60704 377 aa17.3■□□□□ 0.36
TNFSF9-201ENST00000245817 STK17BO94768 372 aa17.3■□□□□ 0.36
TNFSF9-201ENST00000245817 DGCR6Q14129 220 aa17.3■□□□□ 0.36
TNFSF9-201ENST00000245817 NPTX1Q15818 432 aa17.3■□□□□ 0.36
TNFSF9-201ENST00000245817 ZNF141Q15928 474 aa17.3■□□□□ 0.36
TNFSF9-201ENST00000245817 PAPD4Q6PIY7 484 aaKnown RBP17.3■□□□□ 0.36
TNFSF9-201ENST00000245817 DHRS13Q6UX07 377 aa17.3■□□□□ 0.36
TNFSF9-201ENST00000245817 C9orf40Q8IXQ3 194 aa17.3■□□□□ 0.36
TNFSF9-201ENST00000245817 LINC00471Q8N535 108 aa17.3■□□□□ 0.36
TNFSF9-201ENST00000245817 ZNF527Q8NB42 609 aa17.3■□□□□ 0.36
TNFSF9-201ENST00000245817 DDA1Q9BW61 102 aa17.3■□□□□ 0.36
TNFSF9-201ENST00000245817 WWTR1Q9GZV5 400 aa17.3■□□□□ 0.36
TNFSF9-201ENST00000245817 CTPS2Q9NRF8 586 aa17.3■□□□□ 0.36
TNFSF9-201ENST00000245817 POFUT2Q9Y2G5 429 aa17.3■□□□□ 0.36
TNFSF9-201ENST00000245817 TRBV4-1A0A0J9YWV2 114 aa17.29■□□□□ 0.36
TNFSF9-201ENST00000245817 LOC100130705A0A1B0GUX0 176 aa17.29■□□□□ 0.36
TNFSF9-201ENST00000245817 PLD2O14939 933 aa17.29■□□□□ 0.36
TNFSF9-201ENST00000245817 OR10H3O60404 316 aa17.29■□□□□ 0.36
TNFSF9-201ENST00000245817 MITFO75030 526 aaPredicted RBP17.29■□□□□ 0.36
TNFSF9-201ENST00000245817 CNOT3O75175 753 aaKnown RBP17.29■□□□□ 0.36
TNFSF9-201ENST00000245817 SEMA7AO75326 666 aa17.29■□□□□ 0.36
TNFSF9-201ENST00000245817 IL33O95760 270 aa17.29■□□□□ 0.36
TNFSF9-201ENST00000245817 LYNP07948 512 aa17.29■□□□□ 0.36
TNFSF9-201ENST00000245817 ELAVL4P26378 380 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms