RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 FLYWCH1Q4VC44 716 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 SPANXN2Q5MJ10 180 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 LIPKQ5VXJ0 399 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 PRSS41Q7RTY9 318 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 RANBP3LQ86VV4 465 aaPredicted RBP15.06■□□□□ 0
UBE3D-201ENST00000237186 CADM3Q8N126 398 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 CA13Q8N1Q1 262 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 SLC44A3Q8N4M1 653 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 CSNK1A1LQ8N752 337 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 ZNF485Q8NCK3 441 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 TMEM52Q8NDY8 209 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 SLC37A2Q8TED4 501 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 KLHL25Q9H0H3 589 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 TCEAL2Q9H3H9 227 aaPredicted RBP15.06■□□□□ 0
UBE3D-201ENST00000237186 ADAP2Q9NPF8 381 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 POLE3Q9NRF9 147 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 MAT2BQ9NZL9 334 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 TRAPPC4Q9Y296 219 aa15.06■□□□□ 0
UBE3D-201ENST00000237186 EXOGQ9Y2C4 368 aaKnown RBP15.06■□□□□ 0
UBE3D-201ENST00000237186 COL4A2P08572 1712 aa15.05■□□□□ 0
UBE3D-201ENST00000237186 MN1Q10571 1320 aaPredicted RBP15.05■□□□□ -0
UBE3D-201ENST00000237186 SPTY2D1-AS1A0A0U1RR47 76 aa15.05■□□□□ -0
UBE3D-201ENST00000237186 TRAPPC13A5PLN9 417 aa15.05■□□□□ -0
UBE3D-201ENST00000237186 ZNF860A6NHJ4 632 aa15.05■□□□□ -0
UBE3D-201ENST00000237186 WWP2O00308 870 aa15.05■□□□□ -0
UBE3D-201ENST00000237186 CTDSP2O14595 271 aa15.05■□□□□ -0
UBE3D-201ENST00000237186 NTN1O95631 604 aa15.05■□□□□ -0
UBE3D-201ENST00000237186 IL1AP01583 271 aa15.05■□□□□ -0
UBE3D-201ENST00000237186 HMGN1P05114 100 aa15.05■□□□□ -0
UBE3D-201ENST00000237186 EIF2S1P05198 315 aaKnown RBP15.05■□□□□ -0
UBE3D-201ENST00000237186 GUSBP08236 651 aa15.05■□□□□ -0
UBE3D-201ENST00000237186 NID1P14543 1247 aa15.05■□□□□ -0
UBE3D-201ENST00000237186 COPZ1P61923 177 aa15.05■□□□□ -0
UBE3D-201ENST00000237186 COL19A1Q14993 1142 aa15.05■□□□□ -0
UBE3D-201ENST00000237186 PGGHGQ32M88 737 aa15.05■□□□□ -0
UBE3D-201ENST00000237186 PLK5Q496M5 336 aa15.05■□□□□ -0
UBE3D-201ENST00000237186 KIAA0895LQ68EN5 471 aa15.05■□□□□ -0
UBE3D-201ENST00000237186 LAPTM4BQ86VI4 370 aa15.05■□□□□ -0
UBE3D-201ENST00000237186 BRIX1Q8TDN6 353 aaKnown RBP15.05■□□□□ -0
UBE3D-201ENST00000237186 TMEM255BQ8WV15 326 aa15.05■□□□□ -0
UBE3D-201ENST00000237186 CCDC32Q9BV29 185 aa15.05■□□□□ -0
UBE3D-201ENST00000237186 BARHL1Q9BZE3 327 aa15.05■□□□□ -0
UBE3D-201ENST00000237186 SLC7A7Q9UM01 511 aa15.05■□□□□ -0
UBE3D-201ENST00000237186 GPR52Q9Y2T5 361 aa15.05■□□□□ -0
UBE3D-201ENST00000237186 CENPVL1A0A0U1RR11 272 aa15.04■□□□□ -0
UBE3D-201ENST00000237186 IQCMA0A1B0GVH7 501 aa15.04■□□□□ -0
UBE3D-201ENST00000237186 OR5K3A6NET4 321 aa15.04■□□□□ -0
UBE3D-201ENST00000237186 LDB3O75112 727 aa15.04■□□□□ -0
UBE3D-201ENST00000237186 LYPD3O95274 346 aa15.04■□□□□ -0
UBE3D-201ENST00000237186 PTTG1O95997 202 aa15.04■□□□□ -0
UBE3D-201ENST00000237186 LIMS3P0CW19 117 aa15.04■□□□□ -0
UBE3D-201ENST00000237186 LIMS4P0CW20 117 aa15.04■□□□□ -0
UBE3D-201ENST00000237186 ID2Q02363 134 aa15.04■□□□□ -0
UBE3D-201ENST00000237186 KRR1Q13601 381 aaKnown RBP15.04■□□□□ -0
UBE3D-201ENST00000237186 COL9A2Q14055 689 aaPredicted RBP15.04■□□□□ -0
UBE3D-201ENST00000237186 GPR68Q15743 365 aa15.04■□□□□ -0
UBE3D-201ENST00000237186 CLEC12AQ5QGZ9 265 aa15.04■□□□□ -0
UBE3D-201ENST00000237186 TMEFF1Q8IYR6 380 aa15.04■□□□□ -0
UBE3D-201ENST00000237186 ARHGEF39Q8N4T4 335 aa15.04■□□□□ -0
UBE3D-201ENST00000237186 OR2T33Q8NG76 320 aa15.04■□□□□ -0
UBE3D-201ENST00000237186 HMGB4Q8WW32 186 aa15.04■□□□□ -0
UBE3D-201ENST00000237186 TM9SF4Q92544 642 aa15.04■□□□□ -0
UBE3D-201ENST00000237186 WDFY2Q96P53 400 aa15.04■□□□□ -0
UBE3D-201ENST00000237186 SLC30A2Q9BRI3 323 aa15.04■□□□□ -0
UBE3D-201ENST00000237186 JAM3Q9BX67 310 aa15.04■□□□□ -0
UBE3D-201ENST00000237186 TXNL4BQ9NX01 149 aaKnown RBP15.04■□□□□ -0
UBE3D-201ENST00000237186 KCNE5Q9UJ90 142 aa15.04■□□□□ -0
UBE3D-201ENST00000237186 ZNF223Q9UK11 482 aaPredicted RBP15.04■□□□□ -0
UBE3D-201ENST00000237186 FBXL21Q9UKT6 434 aa15.04■□□□□ -0
UBE3D-201ENST00000237186 CARD8Q9Y2G2 431 aa15.04■□□□□ -0
UBE3D-201ENST00000237186 SF3B6Q9Y3B4 125 aaKnown RBP15.04■□□□□ -0
UBE3D-201ENST00000237186 CDHR4A6H8M9 788 aa15.03■□□□□ -0
UBE3D-201ENST00000237186 BRINP1O60477 761 aa15.03■□□□□ -0
UBE3D-201ENST00000237186 NT5EP21589 574 aa15.03■□□□□ -0
UBE3D-201ENST00000237186 IGFBP4P22692 258 aa15.03■□□□□ -0
UBE3D-201ENST00000237186 TNFSF8P32971 234 aa15.03■□□□□ -0
UBE3D-201ENST00000237186 GPR4P46093 362 aa15.03■□□□□ -0
UBE3D-201ENST00000237186 CDH11P55287 796 aa15.03■□□□□ -0
UBE3D-201ENST00000237186 RAB38P57729 211 aa15.03■□□□□ -0
UBE3D-201ENST00000237186 SHC2P98077 582 aa15.03■□□□□ -0
UBE3D-201ENST00000237186 ACSM1Q08AH1 577 aa15.03■□□□□ -0
UBE3D-201ENST00000237186 CCNJQ5T5M9 372 aa15.03■□□□□ -0
UBE3D-201ENST00000237186 NXNL2Q5VZ03 156 aa15.03■□□□□ -0
UBE3D-201ENST00000237186 SLC30A6Q6NXT4 461 aa15.03■□□□□ -0
UBE3D-201ENST00000237186 CHRDL2Q6WN34 429 aa15.03■□□□□ -0
UBE3D-201ENST00000237186 COX18Q8N8Q8 333 aa15.03■□□□□ -0
UBE3D-201ENST00000237186 OR5T3Q8NGG3 340 aa15.03■□□□□ -0
UBE3D-201ENST00000237186 SLC25A46Q96AG3 418 aa15.03■□□□□ -0
UBE3D-201ENST00000237186 ANKRD9Q96BM1 317 aaPredicted RBP15.03■□□□□ -0
UBE3D-201ENST00000237186 NELL2Q99435 816 aa15.03■□□□□ -0
UBE3D-201ENST00000237186 ARHGAP9Q9BRR9 750 aa15.03■□□□□ -0
UBE3D-201ENST00000237186 MED18Q9BUE0 208 aa15.03■□□□□ -0
UBE3D-201ENST00000237186 SEMA6CQ9H3T2 930 aa15.03■□□□□ -0
UBE3D-201ENST00000237186 SMURF1Q9HCE7 757 aa15.03■□□□□ -0
UBE3D-201ENST00000237186 SPIN1Q9Y657 262 aaPredicted RBP15.03■□□□□ -0
UBE3D-201ENST00000237186 CDC42EP2O14613 210 aa15.03■□□□□ -0
UBE3D-201ENST00000237186 NKX2-2O95096 273 aa15.03■□□□□ -0
UBE3D-201ENST00000237186 IGHA1P01876 353 aa15.03■□□□□ -0
UBE3D-201ENST00000237186 SLC35E2P0CK97 266 aa15.03■□□□□ -0
UBE3D-201ENST00000237186 GAAP10253 952 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms