RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 MAMDC2Q7Z304 686 aaPredicted RBP12.5□□□□□ -0.41
UPK1A-201ENST00000222275 GALNTL5Q7Z4T8 443 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 MDGA2Q7Z553 956 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 FGD2Q7Z6J4 655 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 RETREG3Q86VR2 466 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 FJX1Q86VR8 437 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 PRR22Q8IZ63 422 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 CLEC4FQ8N1N0 589 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 FBXW8Q8N3Y1 598 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 POGLUT1Q8NBL1 392 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 CHDHQ8NE62 594 aaPredicted RBP12.5□□□□□ -0.41
UPK1A-201ENST00000222275 OR4N2Q8NGD1 307 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 OR8J3Q8NGG0 315 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 FBXO30Q8TB52 745 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 SPPL2AQ8TCT8 520 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 XAGE5Q8WWM1 108 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 PIK3R3Q92569 461 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 CDS1Q92903 461 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 RELTQ969Z4 430 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 LRRC58Q96CX6 371 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 THUMPD3Q9BV44 507 aaKnown RBP12.5□□□□□ -0.41
UPK1A-201ENST00000222275 SDHAF3Q9NRP4 125 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 VAPAQ9P0L0 249 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 P2RX2Q9UBL9 471 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 TAGLN3Q9UI15 199 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 ABCG2Q9UNQ0 655 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 CSMD2Q7Z408 3487 aa12.5□□□□□ -0.41
UPK1A-201ENST00000222275 ZNF407Q9C0G0 2248 aa12.49□□□□□ -0.41
UPK1A-201ENST00000222275 NME6O75414 186 aaPredicted RBP12.49□□□□□ -0.41
UPK1A-201ENST00000222275 NGFRP08138 427 aa12.49□□□□□ -0.41
UPK1A-201ENST00000222275 OR12D1P0DN82 309 aa12.49□□□□□ -0.41
UPK1A-201ENST00000222275 BMP2P12643 396 aa12.49□□□□□ -0.41
UPK1A-201ENST00000222275 HPGDP15428 266 aa12.49□□□□□ -0.41
UPK1A-201ENST00000222275 DCTP40126 519 aa12.49□□□□□ -0.41
UPK1A-201ENST00000222275 FBXW4P57775 412 aa12.49□□□□□ -0.41
UPK1A-201ENST00000222275 DSTNP60981 165 aa12.49□□□□□ -0.41
UPK1A-201ENST00000222275 RPS26P62854 115 aaKnown RBP12.49□□□□□ -0.41
UPK1A-201ENST00000222275 CDSNQ15517 529 aa12.49□□□□□ -0.41
UPK1A-201ENST00000222275 HEPHL1Q6MZM0 1159 aa12.49□□□□□ -0.41
UPK1A-201ENST00000222275 WDR53Q7Z5U6 358 aaPredicted RBP12.49□□□□□ -0.41
UPK1A-201ENST00000222275 TREML1Q86YW5 311 aa12.49□□□□□ -0.41
UPK1A-201ENST00000222275 POU5F2Q8N7G0 328 aa12.49□□□□□ -0.41
UPK1A-201ENST00000222275 ZNF527Q8NB42 609 aa12.49□□□□□ -0.41
UPK1A-201ENST00000222275 OR10G3Q8NGC4 313 aa12.49□□□□□ -0.41
UPK1A-201ENST00000222275 OR5D16Q8NGK9 328 aa12.49□□□□□ -0.41
UPK1A-201ENST00000222275 HGDQ93099 445 aa12.49□□□□□ -0.41
UPK1A-201ENST00000222275 EFHD2Q96C19 240 aaPredicted RBP12.49□□□□□ -0.41
UPK1A-201ENST00000222275 RCN3Q96D15 328 aa12.49□□□□□ -0.41
UPK1A-201ENST00000222275 FRMD6Q96NE9 622 aa12.49□□□□□ -0.41
UPK1A-201ENST00000222275 TRNT1Q96Q11 434 aaKnown RBP12.49□□□□□ -0.41
UPK1A-201ENST00000222275 FAM173AQ9BQD7 235 aa12.49□□□□□ -0.41
UPK1A-201ENST00000222275 SPATA9Q9BWV2 254 aa12.49□□□□□ -0.41
UPK1A-201ENST00000222275 METTL7AQ9H8H3 244 aa12.49□□□□□ -0.41
UPK1A-201ENST00000222275 IL1RL2Q9HB29 575 aa12.49□□□□□ -0.41
UPK1A-201ENST00000222275 SH2D2AQ9NP31 389 aa12.49□□□□□ -0.41
UPK1A-201ENST00000222275 UBQLN4Q9NRR5 601 aa12.49□□□□□ -0.41
UPK1A-201ENST00000222275 SLC6A13Q9NSD5 602 aa12.49□□□□□ -0.41
UPK1A-201ENST00000222275 SLC25A37Q9NYZ2 338 aa12.49□□□□□ -0.41
UPK1A-201ENST00000222275 SLAMF8Q9P0V8 285 aa12.49□□□□□ -0.41
UPK1A-201ENST00000222275 SEC14L3Q9UDX4 400 aa12.49□□□□□ -0.41
UPK1A-201ENST00000222275 CHCHD2Q9Y6H1 151 aaPredicted RBP12.49□□□□□ -0.41
UPK1A-201ENST00000222275 GXYLT2A0PJZ3 443 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 PINLYPA6NC86 204 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 H3BNH8 94 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 HMGN4O00479 90 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 AIM2O14862 343 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 UGT2B11O75310 529 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 CRYABP02511 175 aaKnown RBP12.48□□□□□ -0.41
UPK1A-201ENST00000222275 NR2F1P10589 423 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 RFC3P40938 356 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 RFX3P48380 749 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 MVDP53602 400 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 CRISP3P54108 245 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 HSF1Q00613 529 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 GTDC1Q4AE62 458 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.48□□□□□ -0.41
UPK1A-201ENST00000222275 PRAMEF8Q5VWM4 474 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 PRAMEF7Q5VXH5 474 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 AP1ARQ63HQ0 302 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 FIGNL1Q6PIW4 674 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 NCCRP1Q6ZVX7 275 aaPredicted RBP12.48□□□□□ -0.41
UPK1A-201ENST00000222275 SERPINA11Q86U17 422 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 PACS2Q86VP3 889 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 MISPQ8IVT2 679 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 SLC30A8Q8IWU4 369 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 MSRB3Q8IXL7 192 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 FITM2Q8N6M3 262 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 OR5M3Q8NGP4 307 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 PNPT1Q8TCS8 783 aaKnown RBP12.48□□□□□ -0.41
UPK1A-201ENST00000222275 AURKBQ96GD4 344 aaPredicted RBP12.48□□□□□ -0.41
UPK1A-201ENST00000222275 SDF2Q99470 211 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 ECSITQ9BQ95 431 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 CPPED1Q9BRF8 314 aaPredicted RBP12.48□□□□□ -0.41
UPK1A-201ENST00000222275 ANGPTL4Q9BY76 406 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 SERHL2Q9H4I8 314 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 CACYBPQ9HB71 228 aaKnown RBP12.48□□□□□ -0.41
UPK1A-201ENST00000222275 KLRF1Q9NZS2 232 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 BOKQ9UMX3 212 aaPredicted RBP12.48□□□□□ -0.41
UPK1A-201ENST00000222275 HRH3Q9Y5N1 445 aa12.48□□□□□ -0.41
UPK1A-201ENST00000222275 PDZD2O15018 2839 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms