RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 TNFRSF12AQ9NP84 129 aa13.56□□□□□ -0.24
UPK3A-201ENST00000216211 MYNNQ9NPC7 610 aa13.56□□□□□ -0.24
UPK3A-201ENST00000216211 MED11Q9P086 117 aa13.56□□□□□ -0.24
UPK3A-201ENST00000216211 C19orf53Q9UNZ5 99 aaPredicted RBP13.56□□□□□ -0.24
UPK3A-201ENST00000216211 ACANP16112 2415 aa13.56□□□□□ -0.24
UPK3A-201ENST00000216211 NIPBLQ6KC79 2804 aaeCLIP13.55□□□□□ -0.24
UPK3A-201ENST00000216211 A0A1W2PNV4 684 aa13.55□□□□□ -0.24
UPK3A-201ENST00000216211 A8MXE2 369 aa13.55□□□□□ -0.24
UPK3A-201ENST00000216211 UPK1AO00322 258 aa13.55□□□□□ -0.24
UPK3A-201ENST00000216211 FADS1O60427 444 aa13.55□□□□□ -0.24
UPK3A-201ENST00000216211 CRCPO75575 148 aa13.55□□□□□ -0.24
UPK3A-201ENST00000216211 SLITRK5O94991 958 aa13.55□□□□□ -0.24
UPK3A-201ENST00000216211 HRGP04196 525 aa13.55□□□□□ -0.24
UPK3A-201ENST00000216211 NEFHP12036 1026 aa13.55□□□□□ -0.24
UPK3A-201ENST00000216211 PEPDP12955 493 aa13.55□□□□□ -0.24
UPK3A-201ENST00000216211 HK1P19367 917 aa13.55□□□□□ -0.24
UPK3A-201ENST00000216211 NTSP30990 170 aa13.55□□□□□ -0.24
UPK3A-201ENST00000216211 CPOXP36551 454 aa13.55□□□□□ -0.24
UPK3A-201ENST00000216211 STX5Q13190 355 aa13.55□□□□□ -0.24
UPK3A-201ENST00000216211 KEAP1Q14145 624 aa13.55□□□□□ -0.24
UPK3A-201ENST00000216211 DEFB113Q30KQ7 82 aa13.55□□□□□ -0.24
UPK3A-201ENST00000216211 CYP27C1Q4G0S4 372 aa13.55□□□□□ -0.24
UPK3A-201ENST00000216211 ATG16L1Q676U5 607 aa13.55□□□□□ -0.24
UPK3A-201ENST00000216211 CHMP1BQ7LBR1 199 aa13.55□□□□□ -0.24
UPK3A-201ENST00000216211 SPATA21Q7Z572 469 aa13.55□□□□□ -0.24
UPK3A-201ENST00000216211 ANKS4BQ8N8V4 417 aa13.55□□□□□ -0.24
UPK3A-201ENST00000216211 OR5M1Q8NGP8 315 aa13.55□□□□□ -0.24
UPK3A-201ENST00000216211 DACH2Q96NX9 599 aa13.55□□□□□ -0.24
UPK3A-201ENST00000216211 SLCO1B3Q9NPD5 702 aa13.55□□□□□ -0.24
UPK3A-201ENST00000216211 DDX18Q9NVP1 670 aaKnown RBP13.55□□□□□ -0.24
UPK3A-201ENST00000216211 MID2Q9UJV3 735 aa13.55□□□□□ -0.24
UPK3A-201ENST00000216211 PACSIN3Q9UKS6 424 aa13.55□□□□□ -0.24
UPK3A-201ENST00000216211 A0A1W2PPR1 153 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 H0YC42 278 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 SMNDC1O75940 238 aaKnown RBP eCLIP13.54□□□□□ -0.24
UPK3A-201ENST00000216211 RSL1D1O76021 490 aaKnown RBP13.54□□□□□ -0.24
UPK3A-201ENST00000216211 GOSR1O95249 250 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 PSMG1O95456 288 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 ALDH3A1P30838 453 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 RFX3P48380 749 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 TPD52P55327 224 aaPredicted RBP13.54□□□□□ -0.24
UPK3A-201ENST00000216211 CLDN15P56746 228 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 ADAM8P78325 824 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 BCL2A1Q16548 175 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 DECR1Q16698 335 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 GLIPR1L2Q4G1C9 344 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 CFAP157Q5JU67 520 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 RAET1LQ5VY80 246 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 NOXRED1Q6NXP6 359 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 VWA1Q6PCB0 445 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 TRIM46Q7Z4K8 759 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 MARCH3Q86UD3 253 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 OR2L13Q8N349 312 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 CNEP1R1Q8N9A8 125 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 CCDC63Q8NA47 563 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 FIG4Q92562 907 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 ELP4Q96EB1 424 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 EGLN2Q96KS0 407 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 AMDHD1Q96NU7 426 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 Q9N2J8 555 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 SDHAF3Q9NRP4 125 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 TAS2R7Q9NYW3 318 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 ABCG2Q9UNQ0 655 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 ARL2BPQ9Y2Y0 163 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 ZNF337Q9Y3M9 751 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 HEATR5AQ86XA9 2040 aa13.54□□□□□ -0.24
UPK3A-201ENST00000216211 SLC22A20A6NK97 555 aa13.53□□□□□ -0.24
UPK3A-201ENST00000216211 H3BML4 177 aa13.53□□□□□ -0.24
UPK3A-201ENST00000216211 MSTNO14793 375 aa13.53□□□□□ -0.24
UPK3A-201ENST00000216211 SEC14L5O43304 696 aa13.53□□□□□ -0.24
UPK3A-201ENST00000216211 SEC22BO75396 215 aa13.53□□□□□ -0.24
UPK3A-201ENST00000216211 TGDSO95455 350 aa13.53□□□□□ -0.24
UPK3A-201ENST00000216211 IL33O95760 270 aa13.53□□□□□ -0.24
UPK3A-201ENST00000216211 CPA3P15088 417 aa13.53□□□□□ -0.24
UPK3A-201ENST00000216211 SUCLG1P53597 346 aaKnown RBP13.53□□□□□ -0.24
UPK3A-201ENST00000216211 DNAJB13P59910 316 aa13.53□□□□□ -0.24
UPK3A-201ENST00000216211 EEF1A1P68104 462 aaKnown RBP13.53□□□□□ -0.24
UPK3A-201ENST00000216211 FAM27E3Q08E93 113 aa13.53□□□□□ -0.24
UPK3A-201ENST00000216211 HSPB3Q12988 150 aa13.53□□□□□ -0.24
UPK3A-201ENST00000216211 GANABQ14697 944 aaKnown RBP13.53□□□□□ -0.24
UPK3A-201ENST00000216211 PCLAFQ15004 111 aa13.53□□□□□ -0.24
UPK3A-201ENST00000216211 ZNHIT3Q15649 155 aaPredicted RBP13.53□□□□□ -0.24
UPK3A-201ENST00000216211 CHI3L2Q15782 390 aa13.53□□□□□ -0.24
UPK3A-201ENST00000216211 EEF1A1P5Q5VTE0 462 aa13.53□□□□□ -0.24
UPK3A-201ENST00000216211 CLEC6AQ6EIG7 209 aa13.53□□□□□ -0.24
UPK3A-201ENST00000216211 IKBIPQ70UQ0 350 aa13.53□□□□□ -0.24
UPK3A-201ENST00000216211 ZNF551Q7Z340 670 aaPredicted RBP13.53□□□□□ -0.24
UPK3A-201ENST00000216211 MEIOBQ8N635 442 aa13.53□□□□□ -0.24
UPK3A-201ENST00000216211 OR6Y1Q8NGX8 325 aa13.53□□□□□ -0.24
UPK3A-201ENST00000216211 DUSP19Q8WTR2 217 aa13.53□□□□□ -0.24
UPK3A-201ENST00000216211 GFM2Q969S9 779 aaKnown RBP13.53□□□□□ -0.24
UPK3A-201ENST00000216211 STARD4Q96DR4 205 aa13.53□□□□□ -0.24
UPK3A-201ENST00000216211 POM121Q96HA1 1249 aa13.53□□□□□ -0.24
UPK3A-201ENST00000216211 C7orf26Q96N11 449 aa13.53□□□□□ -0.24
UPK3A-201ENST00000216211 LMF2Q9BU23 707 aaKnown RBP13.53□□□□□ -0.24
UPK3A-201ENST00000216211 MECRQ9BV79 373 aa13.53□□□□□ -0.24
UPK3A-201ENST00000216211 GSX1Q9H4S2 264 aaPredicted RBP13.53□□□□□ -0.24
UPK3A-201ENST00000216211 KLHL14Q9P2G3 628 aa13.53□□□□□ -0.24
UPK3A-201ENST00000216211 PTGDR2Q9Y5Y4 395 aa13.53□□□□□ -0.24
UPK3A-201ENST00000216211 GXYLT2A0PJZ3 443 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms