RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Nrsn2Q5HZK2 202 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Piwil2Q8CDG1 971 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Fbxw17Q8CFE8 466 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Q8R3Y5 413 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Acot7Q91V12 381 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Stk19Q9JHN8 254 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Rnf32Q9JIT1 368 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Slc6a14Q9JMA9 638 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Dctn6Q9WUB4 190 aa19.73■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Znf382B2RXC5 579 aa19.72■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Prr36E9PV26 1098 aa19.72■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Speer4cG3UXD1 256 aa19.72■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Gm10354K7N6A0 256 aa19.72■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Htr1bP28334 386 aa19.72■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 LhcgrP30730 700 aa19.72■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Srsf6Q3TWW8 339 aaKnown RBP19.72■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Zic2Q62520 530 aa19.72■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 DmknQ6P253 517 aa19.72■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 HltfQ6PCN7 1003 aa19.72■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Ppp2r2bQ6ZWR4 443 aa19.72■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Olfr406Q7TRX0 323 aa19.72■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 PgghgQ8BP56 690 aa19.72■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Lcmt2Q8BYR1 686 aa19.72■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Q8K039 155 aa19.72■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Mospd1Q8VEL0 213 aa19.72■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Nphs2Q91X05 385 aa19.72■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Siglec5Q920G3 569 aa19.72■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 AassQ99K67 926 aa19.72■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 P2ry12Q9CPV9 347 aa19.72■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Chaf1bQ9D0N7 572 aa19.72■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Pycr3Q9DCC4 274 aa19.72■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Vmn1r29Q9EQ41 303 aa19.72■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 CtsjQ9R014 334 aa19.72■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Col4a2P08122 1707 aa19.72■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Zfp937A2ANU7 503 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Tyw5A2RSX7 315 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Galntl6E5D8G1 601 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Vmn2r90E9PXJ8 863 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Gm17175E9Q528 179 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Tlx3O55144 291 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Mup4P11590 178 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 AboP38649 332 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Xrra1Q3U3V8 786 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Defb46Q4QY34 57 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Syce1lQ5D525 247 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Q5EBG8 199 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Tnfaip3Q60769 775 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Olfr169Q7TS53 313 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Vrk1Q80X41 440 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Tmsb15lQ8C0W0 80 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 1700020N01RikQ8CF20 87 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 C1sbQ8CFG8 688 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Alkbh3Q8K1E6 286 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 St8sia6Q8K4T1 398 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Olfr769Q8K501 312 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Ccdc80Q8R2G6 949 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Gabarapl1Q8R3R8 117 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Olfr165Q8VFA2 313 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Olfr854Q8VFF1 315 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Hrasls5Q9CPX5 270 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Q9CPZ3 230 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Vkorc1Q9CRC0 161 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Upk1bQ9Z2C6 260 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Chil5A0A0G2JDS2 431 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Slc25a43A2A3V2 341 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Gm17728E9Q5K2 132 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Vmn2r31L7N1Z4 861 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 OmdO35103 423 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 MndaP0DOV1 425 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 ThrbP37242 461 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Gbx2P48031 348 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Ica1P97411 478 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Acsm3Q3UNX5 580 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Trim40Q3UWA4 246 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Mup20Q5FW60 181 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Olfr295Q7TS08 309 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Klhl13Q80TF4 654 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Grsf1Q8C5Q4 479 aaKnown RBP19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Atxn7l2Q8C8K6 696 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Colec10Q8CF98 277 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Prokr2Q8K458 381 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Olfr1312Q8VF10 317 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Slc3a1Q91WV7 685 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Lrg1Q91XL1 342 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Ndufb2Q9CPU2 105 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Qrsl1Q9CZN8 525 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Spaca1Q9DA48 305 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Plek2Q9WV52 353 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 March7Q9WV66 693 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Efemp2Q9WVJ9 443 aa19.71■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Olfr625-ps1A0A140T8L4 321 aa19.7■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Erich2E9Q1A6 463 aa19.7■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Stk16O88697 305 aa19.7■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Kcnk2P97438 426 aa19.7■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 BcheQ03311 603 aa19.7■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Dnal1Q05A62 190 aa19.7■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Map3k8Q07174 467 aa19.7■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 MagixQ4KL35 324 aa19.7■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Abcb7Q61102 752 aaKnown RBP19.7■□□□□ 0.74
Ccdc88a-202ENSMUST00000109477 Ffar4Q7TMA4 361 aa19.7■□□□□ 0.74
Retrieved 100 of 22,080 RNA–protein pairs in 34 ms