RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Hmgcs2P54869 508 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Chp1P61022 195 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Pih1d3Q3KNI6 218 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Zfp280bQ505F4 534 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Nr1h2Q60644 446 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Edrf1Q6GQV7 1239 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Fam222bQ6P539 562 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 HjurpQ6PG16 667 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Ubtd2Q6PGH0 234 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Kyat3Q71RI9 455 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Arrdc3Q7TPQ9 414 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Olfr1212Q7TR08 311 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Kiaa0895lQ810A5 467 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Atp6v1g3Q8BMC1 118 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Tsen34Q8BMZ5 316 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 PigzQ8BTP0 560 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 WrbQ8K0D7 174 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Lgi2Q8K4Z0 550 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Ugt2b1Q8R084 529 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Vps37bQ8R0J7 285 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Olfr919Q8VF78 315 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Olfr525Q8VGL5 309 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Egln1Q91YE3 400 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Snx18Q91ZR2 614 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 NepnQ9CQ76 512 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Acot13Q9CQR4 140 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Nudt8Q9CR24 210 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Tex29Q9DA77 186 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Rab13Q9DD03 202 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Znf354bQ9QXT9 601 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Scgb2b12S4R2L0 112 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Olfr1109A2AT96 312 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Ptchd4B9EKX1 904 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Vmn2r35E9Q7U8 861 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Cdhr4H3BJZ2 783 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Vmn2r60L7N2A1 853 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 UgcgO88693 394 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Cd74P04441 279 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 XlrP05531 208 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Glud1P26443 558 aaKnown RBP8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Gpr83P30731 423 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Drg1P32233 367 aaKnown RBP8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Stfa2P35174 103 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Foxa2P35583 459 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 NfycP70353 335 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Runx2Q08775 607 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Zcwpw2Q08EN7 125 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Mif4gdQ3UBZ5 222 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Sh2d1b2Q45HK4 132 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Pla2g4fQ50L41 855 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Olfr462Q5SW50 311 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Klhdc10Q6PAR0 439 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Kcnk18Q6VV64 394 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Raver2Q7TPD6 673 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Olfr1357Q7TQU7 313 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Trim36Q80WG7 729 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Foxj3Q8BUR3 623 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Q8C3I9 435 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Mab21L3Q8CI17 429 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Hmgcll1Q8JZS7 343 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Zg16Q8K0C5 167 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 MiosQ8VE19 875 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Olfr54Q8VFE6 313 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Odf4Q8VI88 290 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Syf2Q9D198 242 aaKnown RBP8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Coa3Q9D2R6 108 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Exosc8Q9D753 276 aaKnown RBP8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Rpn2Q9DBG6 631 aaKnown RBP8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Bin3Q9JI08 253 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Tmem196V9GX04 182 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Myh3P13541 1940 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Zscan4-ps1A0A1C7CYV3 506 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Vmn2r121A2BE32 847 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 9330182O14RikJ3QNB2 140 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Gm8265K7N6Y8 158 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Gm6356L7N2A7 188 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Hsd17b10O08756 261 aaKnown RBP8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 FaahO08914 579 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Il4i1O09046 630 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Wnt2P21552 360 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Apobec1P51908 229 aaKnown RBP8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 GnrhrQ01776 327 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 H2-T22Q31615 379 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Trmt1Q3TX08 663 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 AhrrQ3U1U7 701 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Klhdc9Q3USL1 350 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 BC080695Q66JY9 481 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Msantd2Q6NZR2 559 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Zfp512bQ6PHP4 879 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 AptxQ7TQC5 342 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Slc22a20Q80UJ1 556 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Supv3l1Q80YD1 779 aaKnown RBP8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Mgat4aQ812G0 535 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Vipas39Q8BGQ1 491 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 MaobQ8BW75 520 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 ItchQ8C863 864 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Olfr986Q8VFN6 312 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Olfr589Q8VGV8 317 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Mto1Q923Z3 669 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Ctu1Q99J10 420 aa8.46□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 42.4 ms