RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Apoa1Q00623 264 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Pdap1Q3UHX2 181 aaKnown RBP8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Wfdc6aQ3UW55 136 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Phf12Q5SPL2 1003 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Nr2f1Q60632 422 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 ParpbpQ6IRT3 573 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 BC061237Q6P8I2 184 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 RgmaQ6PCX7 454 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Gpr6Q6YNI2 363 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Exosc3Q7TQK4 274 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Olfr1318Q7TQW6 320 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Pum2Q80U58 1066 aaKnown RBP8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Ccdc50Q810U5 305 aaKnown RBP8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Nceh1Q8BLF1 408 aaKnown RBP8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 NarsQ8BP47 559 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 ZxdcQ8C8V1 858 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Dcaf12l1Q8CBW4 501 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 FRRS1Q8K385 592 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Rnf8Q8VC56 488 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Olfr460Q8VF31 314 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Olfr1317Q8VF84 316 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Olfr820Q8VFU5 312 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Asb17Q8VHP9 295 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Vmp1Q99KU0 406 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Itfg1Q99KW9 610 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 4921530L21RikQ9CQ47 274 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Dsn1Q9CYC5 348 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Nde1Q9CZA6 344 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Dnase1l2Q9D1G0 278 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Slc35a4Q9D321 324 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Cib4Q9D9N5 185 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Cypt12Q9DAR6 119 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Mapk11Q9WUI1 364 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Racgap1Q9WVM1 628 aa8.22□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Arhgap21Q6DFV3 1944 aa8.21□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Sptbn4E9PX29 2561 aa8.21□□□□□ -1.09
Ccdc28a-201ENSMUST00000052648 Trav8n-2A0A075B633 112 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Kdf1A2A9F4 397 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Ccdc120A2AEV7 629 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Zfp738B8JJX8 793 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Gm20696H3BJN7 74 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Gm8926L7MUE8 181 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 P01638 115 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 P06336 421 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 OtcP11725 354 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Zfp37P17141 594 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Ctsll3Q3ULP7 331 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Eml4Q3UMY5 988 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Cldn34b4Q3V0X2 211 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Art1Q60935 325 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 NnatQ61979 81 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Tmem121Q80XA0 318 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Tmem30bQ8BHG3 353 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Cstf2Q8BIQ5 580 aaKnown RBP8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Ifi44Q8BV66 422 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 TbcelQ8C5W3 424 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 BivmQ8CBX9 502 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Vmn1r24Q8R2D6 296 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Olfr1312Q8VF10 317 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Adipor1Q91VH1 375 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Pcdhb3Q91XZ7 784 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Actr3Q99JY9 418 aaKnown RBP8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Lactb2Q99KR3 288 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Ints11Q9CWS4 600 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Tomm34Q9CYG7 309 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Mrpl19Q9D338 292 aaKnown RBP8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Slc25a18Q9DB41 320 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Dnajb8Q9QYI7 227 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Zfp292Q9Z2U2 2698 aa8.21□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Mpeg1A1L314 713 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Zfp442A2AQA0 667 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Wdr25E9Q349 535 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Olfr640E9Q7P5 314 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Olfr66F8VQ01 311 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Slc16a5G5E8K6 468 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Olfr209L7N1X3 305 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Scarb2O35114 478 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 NsmafO35242 920 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Slc16a8O35308 492 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Pip5k1cO70161 661 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Tnfrsf17O88472 185 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Thbs1P35441 1170 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Ptx3P48759 381 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Pcbp3P57722 371 aaKnown RBP8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Ptchd3Q0EEE2 906 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Slc35f3Q1LZI2 421 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Tbc1d24Q3UUG6 561 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 AccslQ3UX83 580 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Nxf3Q4ZGD9 553 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Cdh12Q5RJH3 794 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Klhdc10Q6PAR0 439 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 AY358078Q6UY53 465 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Lyve1Q8BHC0 318 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Plppr5Q8BJ52 321 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Pou6f2Q8BJI4 691 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 P2ry10bQ8BY68 352 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Zfp446Q8C9M8 523 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Vps50Q8CI71 964 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Vmn1r38Q8R2E1 302 aa8.2□□□□□ -1.1
Ccdc28a-201ENSMUST00000052648 Pex12Q8VC48 359 aa8.2□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 63.9 ms