RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Vmn1r192Q8K4C9 300 aa10.28□□□□□ -0.76
Msh3-201ENSMUST00000022220 CipcQ8R0W1 432 aa10.28□□□□□ -0.76
Msh3-201ENSMUST00000022220 Olfr1417Q8VGJ6 315 aa10.28□□□□□ -0.76
Msh3-201ENSMUST00000022220 Olfr353Q8VGK0 311 aa10.28□□□□□ -0.76
Msh3-201ENSMUST00000022220 VitQ8VHI5 650 aa10.28□□□□□ -0.76
Msh3-201ENSMUST00000022220 Pno1Q9CPS7 248 aaKnown RBP10.28□□□□□ -0.76
Msh3-201ENSMUST00000022220 EcdQ9CS74 641 aa10.28□□□□□ -0.76
Msh3-201ENSMUST00000022220 Pnp2Q9D8C9 305 aa10.28□□□□□ -0.76
Msh3-201ENSMUST00000022220 Kcne5Q9QZ26 143 aa10.28□□□□□ -0.76
Msh3-201ENSMUST00000022220 Adam25Q9R159 760 aa10.28□□□□□ -0.76
Msh3-201ENSMUST00000022220 Vmn2r106E9PY92 862 aa10.27□□□□□ -0.76
Msh3-201ENSMUST00000022220 AcadvlP50544 656 aa10.27□□□□□ -0.76
Msh3-201ENSMUST00000022220 Opn1swP51491 346 aa10.27□□□□□ -0.76
Msh3-201ENSMUST00000022220 TstP52196 297 aaKnown RBP10.27□□□□□ -0.76
Msh3-201ENSMUST00000022220 Csf2raQ00941 388 aa10.27□□□□□ -0.76
Msh3-201ENSMUST00000022220 GiprQ0P543 460 aa10.27□□□□□ -0.76
Msh3-201ENSMUST00000022220 JamlQ80UL9 379 aa10.27□□□□□ -0.76
Msh3-201ENSMUST00000022220 Coq4Q8BGB8 266 aa10.27□□□□□ -0.76
Msh3-201ENSMUST00000022220 Cdkl3Q8BLF2 595 aa10.27□□□□□ -0.76
Msh3-201ENSMUST00000022220 EfhbQ8CDU5 853 aa10.27□□□□□ -0.76
Msh3-201ENSMUST00000022220 Nupl2Q8CIC2 420 aaKnown RBP10.27□□□□□ -0.76
Msh3-201ENSMUST00000022220 Glcci1Q8K3I9 537 aa10.27□□□□□ -0.76
Msh3-201ENSMUST00000022220 Olfr103Q920Y8 313 aa10.27□□□□□ -0.76
Msh3-201ENSMUST00000022220 Uqcrc1Q9CZ13 480 aaKnown RBP10.27□□□□□ -0.76
Msh3-201ENSMUST00000022220 LhppQ9D7I5 270 aa10.27□□□□□ -0.76
Msh3-201ENSMUST00000022220 Tvp23bQ9D8T4 205 aa10.27□□□□□ -0.76
Msh3-201ENSMUST00000022220 Csnk1dQ9DC28 415 aa10.27□□□□□ -0.76
Msh3-201ENSMUST00000022220 Vmn1r29Q9EQ41 303 aa10.27□□□□□ -0.76
Msh3-201ENSMUST00000022220 Sult2a3D3Z1W5 285 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Hoxd8P23463 289 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Timp2P25785 220 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gm11992Q5SS90 291 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Ptpn18Q61152 453 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Zp1Q62005 623 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 MkxQ8BIA3 353 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Plekhm3Q8BM47 761 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gpr158Q8C419 1200 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 SrrdQ8K2M3 249 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Exosc4Q921I9 245 aaKnown RBP10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 UqcrbQ9D855 111 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Znrf4Q9DAH2 327 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Tprg1lQ9DBS2 266 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Aldh6a1Q9EQ20 535 aaKnown RBP10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Cyp2d22Q9JKY7 500 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Insm2Q9JMC2 493 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Slc35a2Q9R0M8 390 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 CroccQ8CJ40 2009 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Xpnpep2B1AVD1 674 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 CtslP06797 334 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Sstr2P30875 369 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Hoxc5P32043 222 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Capza2P47754 286 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Polr1cP52432 346 aaKnown RBP10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gmeb2P58929 530 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 March9Q3TZ87 348 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gm648Q3UJ22 213 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gtpbp2Q3UJK4 602 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Galnt7Q80VA0 657 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 E330021D16RikQ8BW45 371 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 PpcsQ8VDG5 311 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Cd209aQ91ZX1 238 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Oosp1Q925U0 202 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Fam3bQ9D309 235 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 4930503E14RikQ9D583 177 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Ccdc107Q9DCC3 242 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Wdr61Q9ERF3 305 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Praf2Q9JIG8 178 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Plag1Q9QYE0 499 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 PrkraQ9WTX2 313 aaKnown RBP10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Pcdhgb8A0A140LI48 931 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gm11634A0A1B0GSX1 172 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gm17067E9Q6S4 354 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gm8220F6YKI2 213 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Foxq1O70220 400 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 TtlP38585 377 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 CntfP51642 198 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Pnliprp1Q5BKQ4 473 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Xrcc1Q60596 631 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Rftn1Q6A0D4 554 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 ManealQ6P1J0 452 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Olfr309Q7TS01 308 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Cst13Q80ZN5 141 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Slc35f1Q8BGK5 408 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Enpp6Q8BGN3 440 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Dcaf12l2Q8BGW4 469 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Znf689Q8BKK5 500 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Mettl6Q8BVH9 282 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Cdc73Q8JZM7 531 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Vmn1r234Q8R298 329 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Ubqln1Q8R317 582 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Mrgprb4Q91ZC0 321 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Ubox5Q925F4 539 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Psat1Q99K85 370 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Cmss1Q9CZT6 276 aaKnown RBP10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 B3galt5Q9JI67 308 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Cbll1Q9JIY2 491 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Prss16Q9QXE5 509 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Fbxw5Q9QXW2 573 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Lbx2Q9WUN8 195 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Aloxe3Q9WV07 711 aa10.27□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 42 ms