RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Pdlim3O70209 316 aaKnown RBP15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Gm5571P01639 130 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Slc7a2P18581 657 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 SmsP97355 366 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 ChatQ03059 641 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Pak6Q3ULB5 682 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Pgap1Q3UUQ7 922 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Nr2c1Q505F1 590 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Bcl2l1Q64373 233 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Flywch1Q8CI03 673 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Polr1eQ8K202 482 aaKnown RBP15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Olfr690Q8VH18 315 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Gm16286Q9CQX6 220 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Ssr3Q9DCF9 185 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Cav2Q9WVC3 162 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 TrdcA0A0G2JEU3 153 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Gm42517A0A1Y7VLQ2 374 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Zfp981A2A8V7 445 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Skint4A7TZF3 474 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Hs3st4D3YVV6 449 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Dbx2F8VQH7 377 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Scarb2O35114 478 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 CaskO70589 926 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 P58686 83 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Sim1Q61045 765 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Ptp4a1Q63739 173 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Abcg1Q64343 666 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 MffQ6PCP5 291 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Olfr412Q7TRW7 312 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Efcab3Q80X60 432 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Oas1gQ8K469 367 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Olfr666Q8VH00 318 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Imp3Q921Y2 184 aaKnown RBP15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Mrm2Q9CPY0 246 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Ska2Q9CR46 120 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Mpc2Q9D023 127 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Jam3Q9D8B7 310 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Pard6gQ9JK84 382 aa15.85■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Ttc39aA2ACP1 578 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Xlr5bA2BI50 236 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Adap1E9PY16 374 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Gm3542K7N6U2 270 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Nmur1O55040 428 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Spi1P17433 272 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Taf1aP97357 453 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Tas2r104Q7M723 302 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Rgp1Q8BHT7 391 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Rgs8Q8BXT1 180 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Olfr1352Q8VGX5 309 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 EdaraddQ8VHX2 208 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 B3galnt1Q920V1 331 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 1700086D15RikQ9D9E9 151 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Stk25Q9Z2W1 426 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Trbv2A0A0B4J1G8 114 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Rex2A2AWF2 685 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Prdm13E9PZZ1 754 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Sult2a4L7N245 285 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Rag2P21784 527 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Efnb1P52795 345 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Rps26P62855 115 aaKnown RBP15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Fzd7Q61090 572 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Klk8Q61955 260 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Cachd1Q6PDJ1 1288 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Olfm2Q8BM13 448 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 DpcdQ8BPA8 203 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Gulp1Q8K2A1 304 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 V1ra11Q8R2E6 318 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Vmn1r45Q8VIC7 318 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Abcg4Q91WA9 646 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Tspan31Q9CQ88 210 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Hhipl2Q9D2G9 717 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Rasgef1aA0A0N4SVR5 498 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Trgv2A2J008 116 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 1700080E11RikE9Q9G1 206 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Hoxd12P23812 268 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Csrp2P97314 193 aaKnown RBP15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 P2rx5Q3UYI1 455 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 1700057G04RikQ3V0U0 232 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Taar8aQ5QD07 344 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Mrps16Q9CPX7 135 aaKnown RBP15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Hspa12bQ9CZJ2 685 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 TapbpQ9R233 465 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 RfxankQ9Z205 269 aa15.84■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Ms4a7E9Q9V5 267 aa15.83■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Spata31d1cE9QAF1 853 aa15.83■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Syn1O88935 706 aa15.83■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Pax2P32114 414 aa15.83■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Cep76Q0VEJ0 659 aa15.83■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Alg11Q3TZM9 492 aa15.83■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Ptpn18Q61152 453 aa15.83■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Q6P1I3 445 aa15.83■□□□□ 0.13
Ctcf-201ENSMUST00000005841 PcnpQ6P8I4 178 aaKnown RBP15.83■□□□□ 0.13
Ctcf-201ENSMUST00000005841 ScocQ78YZ6 125 aa15.83■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Cby3Q9CVN6 235 aa15.83■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Dkk3Q9QUN9 349 aa15.83■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Sept5Q9Z2Q6 369 aa15.83■□□□□ 0.13
Ctcf-201ENSMUST00000005841 Ssc4dA1L0T3 586 aa15.83■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Zfp534A2A7A1 661 aa15.83■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Ces2gE9PV38 560 aa15.83■□□□□ 0.12
Ctcf-201ENSMUST00000005841 Rad51Q08297 339 aa15.83■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms