RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	SLC16A11	Q8NCK7	471 aa		13.68	□□□□□ -0.22
PHGDH-231	ENST00000641939	OR14L1P	Q8NHC6	308 aa		13.68	□□□□□ -0.22
PHGDH-231	ENST00000641939	LILRB4	Q8NHJ6	448 aa		13.68	□□□□□ -0.22
PHGDH-231	ENST00000641939	PSMA8	Q8TAA3	256 aa		13.68	□□□□□ -0.22
PHGDH-231	ENST00000641939	FBXO30	Q8TB52	745 aa		13.68	□□□□□ -0.22
PHGDH-231	ENST00000641939	ABTB1	Q969K4	478 aa	Predicted RBP	13.68	□□□□□ -0.22
PHGDH-231	ENST00000641939	MARVELD3	Q96A59	401 aa		13.68	□□□□□ -0.22
PHGDH-231	ENST00000641939	C16orf58	Q96GQ5	468 aa		13.68	□□□□□ -0.22
PHGDH-231	ENST00000641939	UGT2B28	Q9BY64	529 aa		13.68	□□□□□ -0.22
PHGDH-231	ENST00000641939	PRDM14	Q9GZV8	571 aa		13.68	□□□□□ -0.22
PHGDH-231	ENST00000641939	MEAF6	Q9HAF1	191 aa		13.68	□□□□□ -0.22
PHGDH-231	ENST00000641939	NEUROD4	Q9HD90	331 aa		13.68	□□□□□ -0.22
PHGDH-231	ENST00000641939	SDHAF3	Q9NRP4	125 aa		13.68	□□□□□ -0.22
PHGDH-231	ENST00000641939	ZCCHC3	Q9NUD5	404 aa	Known RBP	13.68	□□□□□ -0.22
PHGDH-231	ENST00000641939	TAS2R10	Q9NYW0	307 aa		13.68	□□□□□ -0.22
PHGDH-231	ENST00000641939	FLRT3	Q9NZU0	649 aa		13.68	□□□□□ -0.22
PHGDH-231	ENST00000641939	PPP4R1L	Q9P1A2	415 aa		13.68	□□□□□ -0.22
PHGDH-231	ENST00000641939	FAM47E-STBD1	D6RA91	191 aa		13.67	□□□□□ -0.22
PHGDH-231	ENST00000641939	UTS2	O95399	124 aa		13.67	□□□□□ -0.22
PHGDH-231	ENST00000641939	C6orf47	O95873	294 aa		13.67	□□□□□ -0.22
PHGDH-231	ENST00000641939	IGKV1D-16	P01601	117 aa		13.67	□□□□□ -0.22
PHGDH-231	ENST00000641939	HMGN2	P05204	90 aa	Known RBP	13.67	□□□□□ -0.22
PHGDH-231	ENST00000641939	ALOX5	P09917	674 aa		13.67	□□□□□ -0.22
PHGDH-231	ENST00000641939	LBP	P18428	481 aa		13.67	□□□□□ -0.22
PHGDH-231	ENST00000641939	CCT3	P49368	545 aa	Known RBP	13.67	□□□□□ -0.22
PHGDH-231	ENST00000641939	SF3B4	Q15427	424 aa	Known RBP eCLIP	13.67	□□□□□ -0.22	3e-8	■■■■■ 37.6
PHGDH-231	ENST00000641939	DUSP5	Q16690	384 aa		13.67	□□□□□ -0.22
PHGDH-231	ENST00000641939	PGS1	Q32NB8	556 aa		13.67	□□□□□ -0.22
PHGDH-231	ENST00000641939	EXOSC6	Q5RKV6	272 aa	Known RBP	13.67	□□□□□ -0.22
PHGDH-231	ENST00000641939	DCST1	Q5T197	706 aa		13.67	□□□□□ -0.22
PHGDH-231	ENST00000641939	IFNE	Q86WN2	208 aa		13.67	□□□□□ -0.22
PHGDH-231	ENST00000641939	OR4K17	Q8NGC6	315 aa		13.67	□□□□□ -0.22
PHGDH-231	ENST00000641939	OR56A1	Q8NGH5	318 aa		13.67	□□□□□ -0.22
PHGDH-231	ENST00000641939	JADE3	Q92613	823 aa		13.67	□□□□□ -0.22
PHGDH-231	ENST00000641939	YIPF4	Q9BSR8	244 aa		13.67	□□□□□ -0.22
PHGDH-231	ENST00000641939	DPY30	Q9C005	99 aa		13.67	□□□□□ -0.22
PHGDH-231	ENST00000641939	CXorf36	Q9H7Y0	433 aa		13.67	□□□□□ -0.22
PHGDH-231	ENST00000641939	MANSC1	Q9H8J5	431 aa		13.67	□□□□□ -0.22
PHGDH-231	ENST00000641939	DKKL1	Q9UK85	242 aa		13.67	□□□□□ -0.22
PHGDH-231	ENST00000641939	CAMK2A	Q9UQM7	478 aa		13.67	□□□□□ -0.22
PHGDH-231	ENST00000641939	MRPS18C	Q9Y3D5	142 aa	Known RBP	13.67	□□□□□ -0.22
PHGDH-231	ENST00000641939	MED12L	Q86YW9	2145 aa		13.67	□□□□□ -0.22
PHGDH-231	ENST00000641939	KIAA1549	Q9HCM3	1950 aa		13.67	□□□□□ -0.22
PHGDH-231	ENST00000641939	APC	P25054	2843 aa		13.67	□□□□□ -0.22
PHGDH-231	ENST00000641939	CSMD1	Q96PZ7	3565 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939		A0A0G2JNJ9	132 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	FAM90A27P	A6NNH2	459 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	C17orf51	A8MQB3	221 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939		B4DXG7	233 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	C19orf84	I3L1E1	186 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	CFLAR	O15519	480 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	KCNK2	O95069	426 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	EPPIN	O95925	133 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	COX6B1	P14854	86 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	DPP4	P27487	766 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	ZFP36L2	P47974	494 aa	Known RBP	13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	TP53BP2	Q13625	1128 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	LASP1	Q14847	261 aa	Known RBP	13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	GRAMD1B	Q3KR37	738 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	SPDYE7P	Q495Y7	208 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	ACSF3	Q4G176	576 aa	Predicted RBP	13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	RIPPLY2	Q5TAB7	128 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	FIGNL1	Q6PIW4	674 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	MARCH3	Q86UD3	253 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	COX18	Q8N8Q8	333 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	FADS6	Q8N9I5	356 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	OR8J2	Q8NGG1	315 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	FAM110B	Q8TC76	370 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	SFXN5	Q8TD22	340 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	ARL8A	Q96BM9	186 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	MOAP1	Q96BY2	351 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	WDYHV1	Q96HA8	205 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	STAC	Q99469	402 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	BTBD2	Q9BX70	525 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	TBL1XR1	Q9BZK7	514 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	DSN1	Q9H410	356 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	RUBCNL	Q9H714	662 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	DUSP22	Q9NRW4	184 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939		Q9UFV3	132 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	CREBBP	Q92793	2442 aa		13.66	□□□□□ -0.22
PHGDH-231	ENST00000641939	DCHS2	Q6V1P9	2916 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	TRPC5OS	A6NMA1	111 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	SLCO1B7	G3V0H7	640 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	SDHD	O14521	159 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	HDAC3	O15379	428 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	ZIC3	O60481	467 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	NGFR	P08138	427 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	KRT16	P08779	473 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	LCN1	P31025	176 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	ADH7	P40394	386 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	KIR3DL1	P43629	444 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	GFRA1	P56159	465 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	DSCR4	P56555	118 aa	Predicted RBP	13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	HBA1	P69905	142 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	OCRL	Q01968	901 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	STX5	Q13190	355 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	OR4F3	Q6IEY1	312 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	OGFOD2	Q6N063	350 aa		13.65	□□□□□ -0.22
PHGDH-231	ENST00000641939	CDC73	Q6P1J9	531 aa		13.65	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms