RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 TRMT12Q53H54 448 aaKnown RBP6.95□□□□□ -1.3
PHGDH-217ENST00000641455 SEZ6L2Q6UXD5 910 aa6.95□□□□□ -1.3
PHGDH-217ENST00000641455 TFAP2EQ6VUC0 442 aa6.95□□□□□ -1.3
PHGDH-217ENST00000641455 NUFIP2Q7Z417 695 aaKnown RBP6.95□□□□□ -1.3
PHGDH-217ENST00000641455 GGNQ86UU5 652 aa6.95□□□□□ -1.3
PHGDH-217ENST00000641455 EXOC3L1Q86VI1 746 aa6.95□□□□□ -1.3
PHGDH-217ENST00000641455 WDR75Q8IWA0 830 aaKnown RBP6.95□□□□□ -1.3
PHGDH-217ENST00000641455 RNF214Q8ND24 703 aa6.95□□□□□ -1.3
PHGDH-217ENST00000641455 UHMK1Q8TAS1 419 aaKnown RBP6.95□□□□□ -1.3
PHGDH-217ENST00000641455 ZNF418Q8TF45 676 aaPredicted RBP6.95□□□□□ -1.3
PHGDH-217ENST00000641455 C1GALT1C1Q96EU7 318 aa6.95□□□□□ -1.3
PHGDH-217ENST00000641455 REXO5Q96IC2 774 aaKnown RBP6.95□□□□□ -1.3
PHGDH-217ENST00000641455 RADILQ96JH8 1075 aa6.95□□□□□ -1.3
PHGDH-217ENST00000641455 USB1Q9BQ65 265 aaKnown RBP6.95□□□□□ -1.3
PHGDH-217ENST00000641455 DESI2Q9BSY9 194 aa6.95□□□□□ -1.3
PHGDH-217ENST00000641455 LRRC1Q9BTT6 524 aa6.95□□□□□ -1.3
PHGDH-217ENST00000641455 ZNF717Q9BY31 904 aaPredicted RBP6.95□□□□□ -1.3
PHGDH-217ENST00000641455 CD244Q9BZW8 370 aa6.95□□□□□ -1.3
PHGDH-217ENST00000641455 DERL2Q9GZP9 239 aa6.95□□□□□ -1.3
PHGDH-217ENST00000641455 TMEM185BQ9H7F4 350 aa6.95□□□□□ -1.3
PHGDH-217ENST00000641455 DDX31Q9H8H2 851 aaKnown RBP6.95□□□□□ -1.3
PHGDH-217ENST00000641455 OPTCQ9UBM4 332 aa6.95□□□□□ -1.3
PHGDH-217ENST00000641455 VDAC3Q9Y277 283 aa6.95□□□□□ -1.3
PHGDH-217ENST00000641455 GPR55Q9Y2T6 319 aaPredicted RBP6.95□□□□□ -1.3
PHGDH-217ENST00000641455 OR10H1Q9Y4A9 318 aa6.95□□□□□ -1.3
PHGDH-217ENST00000641455 ANGPTL3Q9Y5C1 460 aa6.95□□□□□ -1.3
PHGDH-217ENST00000641455 PMF1-BGLAPU3KQ54 211 aa6.95□□□□□ -1.3
PHGDH-217ENST00000641455 PKD1L1Q8TDX9 2849 aa6.95□□□□□ -1.3
PHGDH-217ENST00000641455 LRP5LA4QPB2 252 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 VWC2LB2RUY7 222 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 TMPRSS2O15393 492 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 ATP1B1P05026 303 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 DHRS4L1P0CG22 281 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 ZNF23P17027 643 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 CSNK2A2P19784 350 aaPredicted RBP6.94□□□□□ -1.3
PHGDH-217ENST00000641455 CLK3P49761 638 aaKnown RBP6.94□□□□□ -1.3
PHGDH-217ENST00000641455 EMDP50402 254 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 ZNF83P51522 516 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 ARFIP1P53367 373 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 PNLIPRP2P54317 469 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 GPX6P59796 221 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 SPOCK1Q08629 439 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 MGAT2Q10469 447 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 OR4D1Q15615 310 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 ERCC6LQ2NKX8 1250 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 CDKL4Q5MAI5 379 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 SH2D4BQ5SQS7 431 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 HP1BP3Q5SSJ5 553 aaPredicted RBP6.94□□□□□ -1.3
PHGDH-217ENST00000641455 PDSS1Q5T2R2 415 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 HBMQ6B0K9 141 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 TRMT10BQ6PF06 316 aaKnown RBP6.94□□□□□ -1.3
PHGDH-217ENST00000641455 SHQ1Q6PI26 577 aaKnown RBP6.94□□□□□ -1.3
PHGDH-217ENST00000641455 TMEM108Q6UXF1 575 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 Q6ZSR9 355 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 SLC44A2Q8IWA5 706 aaPredicted RBP6.94□□□□□ -1.3
PHGDH-217ENST00000641455 NAT8LQ8N9F0 302 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 PDPRQ8NCN5 879 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 OR2V1Q8NHB1 315 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 DUSP19Q8WTR2 217 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 ABHD3Q8WU67 409 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 KLHL29Q96CT2 875 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 FOXN4Q96NZ1 517 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 HBEGFQ99075 208 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 SOX7Q9BT81 388 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 RBM4Q9BWF3 364 aaKnown RBP6.94□□□□□ -1.3
PHGDH-217ENST00000641455 TRIM5Q9C035 493 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 ZNF696Q9H7X3 374 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 NPAP1Q9NZP6 1156 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 ASIC3Q9UHC3 531 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 MGAT4BQ9UQ53 548 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 ZNF281Q9Y2X9 895 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 PCDHGB1Q9Y5G3 927 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 PCDHGA11Q9Y5H2 935 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 PSAT1Q9Y617 370 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 ATP23Q9Y6H3 246 aa6.94□□□□□ -1.3
PHGDH-217ENST00000641455 LOC390937A0A1W2PQ73 354 aa6.93□□□□□ -1.3
PHGDH-217ENST00000641455 SUPT3HB4E1H0 165 aa6.93□□□□□ -1.3
PHGDH-217ENST00000641455 K7EPI3 171 aa6.93□□□□□ -1.3
PHGDH-217ENST00000641455 SUPT3HO75486 399 aa6.93□□□□□ -1.3
PHGDH-217ENST00000641455 IL33O95760 270 aa6.93□□□□□ -1.3
PHGDH-217ENST00000641455 KLK1P06870 262 aa6.93□□□□□ -1.3
PHGDH-217ENST00000641455 PABPC4LP0CB38 370 aaKnown RBP6.93□□□□□ -1.3
PHGDH-217ENST00000641455 CT45A8P0DMV1 189 aa6.93□□□□□ -1.3
PHGDH-217ENST00000641455 CT45A9P0DMV2 189 aa6.93□□□□□ -1.3
PHGDH-217ENST00000641455 PCMT1P22061 227 aa6.93□□□□□ -1.3
PHGDH-217ENST00000641455 ME2P23368 584 aa6.93□□□□□ -1.3
PHGDH-217ENST00000641455 APEX1P27695 318 aaKnown RBP6.93□□□□□ -1.3
PHGDH-217ENST00000641455 ARL1P40616 181 aaPredicted RBP6.93□□□□□ -1.3
PHGDH-217ENST00000641455 RFX3P48380 749 aa6.93□□□□□ -1.3
PHGDH-217ENST00000641455 ALDH9A1P49189 494 aa6.93□□□□□ -1.3
PHGDH-217ENST00000641455 MAPK12P53778 367 aa6.93□□□□□ -1.3
PHGDH-217ENST00000641455 LGALS3BPQ08380 585 aa6.93□□□□□ -1.3
PHGDH-217ENST00000641455 ZNF155Q12901 538 aaPredicted RBP6.93□□□□□ -1.3
PHGDH-217ENST00000641455 SCGB2A2Q13296 93 aa6.93□□□□□ -1.3
PHGDH-217ENST00000641455 CUL3Q13618 768 aa6.93□□□□□ -1.3
PHGDH-217ENST00000641455 E2F2Q14209 437 aa6.93□□□□□ -1.3
PHGDH-217ENST00000641455 CPSF6Q16630 551 aaKnown RBP eCLIP6.93□□□□□ -1.3
PHGDH-217ENST00000641455 GLYR1Q49A26 553 aaPredicted RBP6.93□□□□□ -1.3
PHGDH-217ENST00000641455 AWAT1Q58HT5 328 aa6.93□□□□□ -1.3
PHGDH-217ENST00000641455 CT45A2Q5DJT8 189 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms