RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 FBXO4Q9UKT5 387 aa16.06■□□□□ 0.16
PHGDH-208ENST00000641023 TNRC6BQ9UPQ9 1833 aaKnown RBP16.05■□□□□ 0.16
PHGDH-208ENST00000641023 CLDN24A6NM45 220 aa16.05■□□□□ 0.16
PHGDH-208ENST00000641023 HRKO00198 91 aa16.05■□□□□ 0.16
PHGDH-208ENST00000641023 GUSBP08236 651 aa16.05■□□□□ 0.16
PHGDH-208ENST00000641023 ATXN8OSP0DMR3 200 aa16.05■□□□□ 0.16
PHGDH-208ENST00000641023 POU1F1P28069 291 aa16.05■□□□□ 0.16
PHGDH-208ENST00000641023 CNR2P34972 360 aa16.05■□□□□ 0.16
PHGDH-208ENST00000641023 MAPK14Q16539 360 aa16.05■□□□□ 0.16
PHGDH-208ENST00000641023 PRAMEF17Q5VTA0 474 aa16.05■□□□□ 0.16
PHGDH-208ENST00000641023 C1orf94Q6P1W5 598 aa16.05■□□□□ 0.16
PHGDH-208ENST00000641023 PLEKHM3Q6ZWE6 761 aa16.05■□□□□ 0.16
PHGDH-208ENST00000641023 RANBP3LQ86VV4 465 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-208ENST00000641023 MORN4Q8NDC4 146 aa16.05■□□□□ 0.16
PHGDH-208ENST00000641023 RHOXF1Q8NHV9 184 aa16.05■□□□□ 0.16
PHGDH-208ENST00000641023 DIO2Q92813 273 aa16.05■□□□□ 0.16
PHGDH-208ENST00000641023 NAT6Q93015 286 aa16.05■□□□□ 0.16
PHGDH-208ENST00000641023 NECAB3Q96P71 396 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-208ENST00000641023 PRR14Q9BWN1 585 aa16.05■□□□□ 0.16
PHGDH-208ENST00000641023 CCDC90BQ9GZT6 254 aa16.05■□□□□ 0.16
PHGDH-208ENST00000641023 OR10A5Q9H207 317 aa16.05■□□□□ 0.16
PHGDH-208ENST00000641023 DUSP21Q9H596 190 aa16.05■□□□□ 0.16
PHGDH-208ENST00000641023 Q9N2J8 555 aa16.05■□□□□ 0.16
PHGDH-208ENST00000641023 ERVK-19Q9WJR5 959 aa16.05■□□□□ 0.16
PHGDH-208ENST00000641023 COMMD3-BMI1R4GMX3 469 aa16.05■□□□□ 0.16
PHGDH-208ENST00000641023 LY6G6EA0A0G2JKS1 128 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 A0A1B0GX78 115 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 TTC36A6NLP5 189 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 ZAR1LA6NP61 321 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 PEX12O00623 359 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 DSCR3O14972 297 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 DYRK3O43781 588 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 MPZL2O60487 215 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 FAM20BO75063 409 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 WBP4O75554 376 aaKnown RBP16.04■□□□□ 0.16
PHGDH-208ENST00000641023 JUNBP17275 347 aaPredicted RBP16.04■□□□□ 0.16
PHGDH-208ENST00000641023 TRHRP34981 398 aaPredicted RBP16.04■□□□□ 0.16
PHGDH-208ENST00000641023 RFX3P48380 749 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 SLC35A2P78381 396 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 RAB39AQ14964 217 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 FLYWCH1Q4VC44 716 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 PERM1Q5SV97 790 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 MFSD4BQ5TF39 518 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 CD300LDQ6UXZ3 194 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 QSOX2Q6ZRP7 698 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 TOR1AIP2Q8NFQ8 470 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 APH1BQ8WW43 257 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 IPCEF1Q8WWN9 437 aaPredicted RBP16.04■□□□□ 0.16
PHGDH-208ENST00000641023 SGCDQ92629 289 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 NMD3Q96D46 503 aaKnown RBP16.04■□□□□ 0.16
PHGDH-208ENST00000641023 DPYSL5Q9BPU6 564 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 SEMA4GQ9NTN9 838 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 PAK1IP1Q9NWT1 392 aaPredicted RBP16.04■□□□□ 0.16
PHGDH-208ENST00000641023 REV1Q9UBZ9 1251 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 FTSJ1Q9UET6 329 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 PRODH2Q9UF12 536 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 ATXN7L1Q9ULK2 861 aaPredicted RBP16.04■□□□□ 0.16
PHGDH-208ENST00000641023 U3KQA8 63 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 RP1P56715 2156 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 A0A087WUU8 490 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 CENPVL1A0A0U1RR11 272 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 C17orf105B2RV13 164 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 H3BN98 237 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 OR5F1O95221 314 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 HTR1AP08908 422 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 ANKRD34CP0C6C1 535 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 FBLP22087 321 aaKnown RBP16.04■□□□□ 0.16
PHGDH-208ENST00000641023 TEKQ02763 1124 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 ACY1Q03154 408 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 SMN1Q16637 294 aaKnown RBP16.04■□□□□ 0.16
PHGDH-208ENST00000641023 MINDY4Q4G0A6 757 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 MRPL2Q5T653 305 aaKnown RBP16.04■□□□□ 0.16
PHGDH-208ENST00000641023 ZNF574Q6ZN55 896 aaPredicted RBP16.04■□□□□ 0.16
PHGDH-208ENST00000641023 ZER1Q7Z7L7 766 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 EID2Q8N6I1 236 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.04■□□□□ 0.16
PHGDH-208ENST00000641023 POLR2J2Q9GZM3 115 aaKnown RBP16.04■□□□□ 0.16
PHGDH-208ENST00000641023 KCNE5Q9UJ90 142 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 TECTAO75443 2155 aa16.04■□□□□ 0.16
PHGDH-208ENST00000641023 CDHR4A6H8M9 788 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 MRPS14O60783 128 aaKnown RBP16.03■□□□□ 0.16
PHGDH-208ENST00000641023 CER1O95813 267 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 RPLP0P05388 317 aaKnown RBP16.03■□□□□ 0.16
PHGDH-208ENST00000641023 GSTM3P21266 225 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 MMP11P24347 488 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 KRT20P35900 424 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 HOXC5Q00444 222 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 PIGFQ07326 219 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 XAF1Q6GPH4 301 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 LAIR1Q6GTX8 287 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 ZC3H14Q6PJT7 736 aaKnown RBP16.03■□□□□ 0.16
PHGDH-208ENST00000641023 ZNF730Q6ZMV8 503 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 CLVS1Q8IUQ0 354 aaPredicted RBP16.03■□□□□ 0.16
PHGDH-208ENST00000641023 OR7G1Q8NGA0 311 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 OR4D9Q8NGE8 314 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 C16orf52Q8NHV5 167 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 G6PC3Q9BUM1 346 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 SLC7A5P2Q9GIP4 190 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 EVA1AQ9H8M9 152 aa16.03■□□□□ 0.16
PHGDH-208ENST00000641023 SLC6A14Q9UN76 642 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms