RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-222ENST00000640634 SLC35A4Q96G79 324 aa10.05□□□□□ -0.8
SCARB2-222ENST00000640634 NODALQ96S42 347 aa10.05□□□□□ -0.8
SCARB2-222ENST00000640634 ADOQ96SZ5 270 aa10.05□□□□□ -0.8
SCARB2-222ENST00000640634 SLC39A3Q9BRY0 314 aa10.05□□□□□ -0.8
SCARB2-222ENST00000640634 IKZF5Q9H5V7 419 aa10.05□□□□□ -0.8
SCARB2-222ENST00000640634 TRIM45Q9H8W5 580 aaPredicted RBP10.05□□□□□ -0.8
SCARB2-222ENST00000640634 ABI3Q9P2A4 366 aa10.05□□□□□ -0.8
SCARB2-222ENST00000640634 PCDHGB4Q9UN71 923 aa10.05□□□□□ -0.8
SCARB2-222ENST00000640634 OR10H1Q9Y4A9 318 aa10.05□□□□□ -0.8
SCARB2-222ENST00000640634 CHCHD2Q9Y6H1 151 aaPredicted RBP10.05□□□□□ -0.8
SCARB2-222ENST00000640634 NPIPA5A0A0B4J1W7 369 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 LOC100653049A0A140TA62 436 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 A0A1W2PP18 115 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 PRAMEF27A3QJZ7 478 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 NPIPA7E9PJI5 369 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 PYCARD-AS1I3L0S3 204 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 TO15178 435 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 PPM1BO75688 479 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 KRT34O76011 436 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 NKX2-2O95096 273 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 SP1P08047 785 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 NPIPA8P0DM63 369 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 UQCRC2P22695 453 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 CHI3L1P36222 383 aaPredicted RBP10.04□□□□□ -0.8
SCARB2-222ENST00000640634 CASRP41180 1078 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 DNASE1L1P49184 302 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 MVDP53602 400 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 FUT5Q11128 374 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 KLRB1Q12918 225 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 RNFT1Q5M7Z0 435 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.04□□□□□ -0.8
SCARB2-222ENST00000640634 OPN5Q6U736 354 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 HMGN2P46Q86SG4 172 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 TAGAPQ8N103 731 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 SLC34A3Q8N130 599 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 HORMAD2Q8N7B1 307 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 CDRT4Q8N9R6 151 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 GATAD2BQ8WXI9 593 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 HGDQ93099 445 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 PNPLA2Q96AD5 504 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 SCMH1Q96GD3 660 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 ITCHQ96J02 903 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 SLC35G5Q96KT7 338 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 OR7D2Q96RA2 312 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 CCDC106Q9BWC9 280 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 RTN4RQ9BZR6 473 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 OR51I1Q9H343 314 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 PROK2Q9HC23 129 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 GALNT9Q9HCQ5 603 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 SH2D2AQ9NP31 389 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 VAPAQ9P0L0 249 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 VPS4AQ9UN37 437 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 CFL2Q9Y281 166 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 PCDHB14Q9Y5E9 798 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 CENPVL1A0A0U1RR11 272 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 B4DXG7 233 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 ZNHIT1O43257 154 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 NME2P1O60361 137 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 TSPAN2O60636 221 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 ICOSLGO75144 302 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 REM1O75628 298 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 ZIC2O95409 532 aaPredicted RBP10.04□□□□□ -0.8
SCARB2-222ENST00000640634 IL33O95760 270 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 SNRPB2P08579 225 aaKnown RBP10.04□□□□□ -0.8
SCARB2-222ENST00000640634 IFI6P09912 130 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 OR12D1P0DN82 309 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 SFTPCP11686 197 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 CYP4B1P13584 511 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 NME2P22392 152 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 NRG3P56975 720 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 MRPS22P82650 360 aaKnown RBP10.04□□□□□ -0.8
SCARB2-222ENST00000640634 SELPLGQ14242 412 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 CAPRIN1Q14444 709 aaKnown RBP10.04□□□□□ -0.8
SCARB2-222ENST00000640634 NTRK2Q16620 822 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 SLC25A25Q6KCM7 469 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 CDC73Q6P1J9 531 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 DLEU7Q6UYE1 221 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 RTL4Q6ZR62 310 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.04□□□□□ -0.8
SCARB2-222ENST00000640634 SULF2Q8IWU5 870 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 CISD2Q8N5K1 135 aaKnown RBP10.04□□□□□ -0.8
SCARB2-222ENST00000640634 COX18Q8N8Q8 333 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 ZFP90Q8TF47 636 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 NEURL3Q96EH8 262 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 KCNK17Q96T54 332 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 ACTRT3Q9BYD9 372 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 GIN1Q9NXP7 522 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 CNOT11Q9UKZ1 510 aaKnown RBP10.04□□□□□ -0.8
SCARB2-222ENST00000640634 CBLCQ9ULV8 474 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 ZNF232Q9UNY5 417 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 CAPN7Q9Y6W3 813 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 COL6A6A6NMZ7 2263 aa10.04□□□□□ -0.8
SCARB2-222ENST00000640634 A0A096LPI6 279 aa10.03□□□□□ -0.8
SCARB2-222ENST00000640634 TRBV5-3A0A0A0MS03 114 aa10.03□□□□□ -0.8
SCARB2-222ENST00000640634 TRAV17A0A0B4J275 112 aa10.03□□□□□ -0.8
SCARB2-222ENST00000640634 ADAM10O14672 748 aa10.03□□□□□ -0.8
SCARB2-222ENST00000640634 ACOX3O15254 700 aa10.03□□□□□ -0.8
SCARB2-222ENST00000640634 KCNK2O95069 426 aa10.03□□□□□ -0.8
SCARB2-222ENST00000640634 UNC5CO95185 931 aa10.03□□□□□ -0.8
SCARB2-222ENST00000640634 ANP32DO95626 131 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms