RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 SORDQ00796 357 aa12.57□□□□□ -0.4
HLA-C-210ENST00000640219 CLCQ05315 142 aa12.57□□□□□ -0.4
HLA-C-210ENST00000640219 ADRM1Q16186 407 aa12.57□□□□□ -0.4
HLA-C-210ENST00000640219 RNF220Q5VTB9 566 aa12.57□□□□□ -0.4
HLA-C-210ENST00000640219 FRG2Q64ET8 278 aa12.57□□□□□ -0.4
HLA-C-210ENST00000640219 NIPAL1Q6NVV3 410 aa12.57□□□□□ -0.4
HLA-C-210ENST00000640219 IL20RBQ6UXL0 311 aa12.57□□□□□ -0.4
HLA-C-210ENST00000640219 RNF111Q6ZNA4 994 aa12.57□□□□□ -0.4
HLA-C-210ENST00000640219 LARP4Q71RC2 724 aaKnown RBP eCLIP12.57□□□□□ -0.47e-7■■■□□ 16.1
HLA-C-210ENST00000640219 GPALPP1Q8IXQ4 340 aa12.57□□□□□ -0.4
HLA-C-210ENST00000640219 TNIP2Q8NFZ5 429 aa12.57□□□□□ -0.4
HLA-C-210ENST00000640219 ASB15Q8WXK1 588 aa12.57□□□□□ -0.4
HLA-C-210ENST00000640219 RGMAQ96B86 450 aa12.57□□□□□ -0.4
HLA-C-210ENST00000640219 PERPQ96FX8 193 aa12.57□□□□□ -0.4
HLA-C-210ENST00000640219 FRG2BQ96QU4 278 aa12.57□□□□□ -0.4
HLA-C-210ENST00000640219 FAM173AQ9BQD7 235 aa12.57□□□□□ -0.4
HLA-C-210ENST00000640219 NTMT1Q9BV86 223 aa12.57□□□□□ -0.4
HLA-C-210ENST00000640219 ALOXE3Q9BYJ1 711 aa12.57□□□□□ -0.4
HLA-C-210ENST00000640219 TNFRSF12AQ9NP84 129 aa12.57□□□□□ -0.4
HLA-C-210ENST00000640219 TEX10Q9NXF1 929 aaPredicted RBP12.57□□□□□ -0.4
HLA-C-210ENST00000640219 CCDC167Q9P0B6 97 aa12.57□□□□□ -0.4
HLA-C-210ENST00000640219 MMACHCQ9Y4U1 282 aa12.57□□□□□ -0.4
HLA-C-210ENST00000640219 TIMM22Q9Y584 194 aa12.57□□□□□ -0.4
HLA-C-210ENST00000640219 PCDHGA11Q9Y5H2 935 aa12.57□□□□□ -0.4
HLA-C-210ENST00000640219 ARID1AO14497 2285 aa12.57□□□□□ -0.4
HLA-C-210ENST00000640219 A0A0A6YYD5 115 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 PRSS51A0A1B0GVH4 220 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 A0A1W2PR48 441 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 CLDN4O14493 209 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 UBFD1O14562 309 aaKnown RBP12.56□□□□□ -0.4
HLA-C-210ENST00000640219 ACOT8O14734 319 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 ANGPT2O15123 496 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 HCN1O60741 890 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 SCELO95171 688 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 CNOT4O95628 575 aaKnown RBP12.56□□□□□ -0.4
HLA-C-210ENST00000640219 AIFM1O95831 613 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 SLC7A1P30825 629 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 CEACAM8P31997 349 aaPredicted RBP12.56□□□□□ -0.4
HLA-C-210ENST00000640219 FOXA1P55317 472 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 HSD17B7P56937 341 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 TNFRSF17Q02223 184 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 TGM3Q08188 693 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 DYNC1I2Q13409 638 aaKnown RBP12.56□□□□□ -0.4
HLA-C-210ENST00000640219 ZNF750Q32MQ0 723 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 LIN52Q52LA3 116 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 TMEM35AQ53FP2 167 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 FAM180BQ6P0A1 224 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 POMZP3Q6PJE2 187 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 DHFR2Q86XF0 187 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 DDIASQ8IXT1 998 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 ZNF595Q8IYB9 648 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 B3GNT7Q8NFL0 401 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 TSPEARQ8WU66 669 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 PTPMT1Q8WUK0 201 aaPredicted RBP12.56□□□□□ -0.4
HLA-C-210ENST00000640219 SMPDL3BQ92485 455 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 DUS3LQ96G46 650 aaKnown RBP12.56□□□□□ -0.4
HLA-C-210ENST00000640219 CCT7Q99832 543 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 OR8D2Q9GZM6 311 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 LYRM4Q9HD34 91 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 PAPOLBQ9NRJ5 636 aaKnown RBP12.56□□□□□ -0.4
HLA-C-210ENST00000640219 SPRR3Q9UBC9 169 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 PACSIN3Q9UKS6 424 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 ARHGAP21Q5T5U3 1957 aa12.56□□□□□ -0.4
HLA-C-210ENST00000640219 HAX1O00165 279 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 PGRMC2O15173 223 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 UGDHO60701 494 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 ZNF354AO60765 605 aaPredicted RBP12.55□□□□□ -0.4
HLA-C-210ENST00000640219 CTNSO60931 367 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 OR2J2O76002 312 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 OR6B1O95007 311 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 TNFAIP8O95379 198 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 KLK1P06870 262 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 IDO1P14902 403 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 ENDOUP21128 410 aaKnown RBP12.55□□□□□ -0.4
HLA-C-210ENST00000640219 GPR143P51810 404 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 MS4A2Q01362 244 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 STX4Q12846 297 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 BNIP2Q12982 314 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 LCP2Q13094 533 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 HYAL4Q2M3T9 481 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 COQ5Q5HYK3 327 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 KANK2Q63ZY3 851 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 MRM1Q6IN84 353 aaKnown RBP12.55□□□□□ -0.4
HLA-C-210ENST00000640219 GPR180Q86V85 440 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 RNF148Q8N7C7 305 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 GOLM1Q8NBJ4 401 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 ZFAND2BQ8WV99 257 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 TWIST2Q8WVJ9 160 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 SELENOMQ8WWX9 145 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 EME1Q96AY2 570 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 REPS1Q96D71 796 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 DACH2Q96NX9 599 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 PKP2Q99959 881 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 C1QTNF3Q9BXJ4 246 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 MRPS26Q9BYN8 205 aaKnown RBP12.55□□□□□ -0.4
HLA-C-210ENST00000640219 MUC13Q9H3R2 512 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 ELOVL6Q9H5J4 265 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 AKTIPQ9H8T0 292 aa12.55□□□□□ -0.4
HLA-C-210ENST00000640219 CLK4Q9HAZ1 481 aaKnown RBP12.55□□□□□ -0.4
HLA-C-210ENST00000640219 ADAP2Q9NPF8 381 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms