RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 ZIC1Q15915 447 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 NADK2Q4G0N4 442 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 COLEC12Q5KU26 742 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.63□□□□□ -1.51
ATM-229ENST00000639953 INTS11Q5TA45 600 aaKnown RBP5.63□□□□□ -1.51
ATM-229ENST00000639953 CAPN13Q6MZZ7 669 aaPredicted RBP5.63□□□□□ -1.51
ATM-229ENST00000639953 MED27Q6P2C8 311 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 LCTLQ6UWM7 567 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 ZNF793Q6ZN11 406 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 ZNF621Q6ZSS3 439 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 ARHGAP22Q7Z5H3 698 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 AMIGO1Q86WK6 493 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 OOSP2Q86WS3 158 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 TMEM126BQ8IUX1 230 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 TBC1D21Q8IYX1 336 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 OR2T12Q8NG77 320 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 OR2A1Q8NGT9 310 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 WDR36Q8NI36 951 aaKnown RBP5.63□□□□□ -1.51
ATM-229ENST00000639953 DOK4Q8TEW6 326 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 CREB3L4Q8TEY5 395 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 ZFPM2Q8WW38 1151 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 EME1Q96AY2 570 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 CENPNQ96H22 339 aaPredicted RBP5.63□□□□□ -1.51
ATM-229ENST00000639953 SLC46A1Q96NT5 459 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 FCRL4Q96PJ5 515 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 TEFMQ96QE5 360 aaKnown RBP5.63□□□□□ -1.51
ATM-229ENST00000639953 OR2A14Q96R47 310 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 ZBTB18Q99592 522 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 CMKLR1Q99788 373 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 CTRCQ99895 268 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 DUSP26Q9BV47 211 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 ZNF696Q9H7X3 374 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 CXorf36Q9H7Y0 433 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 APMAPQ9HDC9 416 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 ASCL3Q9NQ33 180 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 BATF3Q9NR55 127 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 SIRT3Q9NTG7 399 aaPredicted RBP5.63□□□□□ -1.51
ATM-229ENST00000639953 FOXJ2Q9P0K8 574 aa5.63□□□□□ -1.51
ATM-229ENST00000639953 SNRNP200O75643 2136 aaKnown RBP5.63□□□□□ -1.51
ATM-229ENST00000639953 SLC9B1P1A6NJY1 282 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 TRIM64CA6NLI5 447 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 CDRT15L2A8MXV6 281 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 H0YJX3 145 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 hCG_2039718K7EN88 272 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 FOXE1O00358 373 aaPredicted RBP5.62□□□□□ -1.51
ATM-229ENST00000639953 UGDHO60701 494 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 ERN1O75460 977 aaKnown RBP5.62□□□□□ -1.51
ATM-229ENST00000639953 SCELO95171 688 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 NTN1O95631 604 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 OPN1SWP03999 348 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 ABCB1P08183 1280 aaPredicted RBP5.62□□□□□ -1.51
ATM-229ENST00000639953 HTR1AP08908 422 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 CHRM5P08912 532 aaPredicted RBP5.62□□□□□ -1.51
ATM-229ENST00000639953 ADRA2AP08913 450 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 HKR1P10072 659 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 UMPSP11172 480 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 COX7A2P14406 83 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 ATP6V1B1P15313 513 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 FOLR1P15328 257 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 ST6GAL1P15907 406 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 UGT2B7P16662 529 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 AGXTP21549 392 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 CDH3P22223 829 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 IL10P22301 178 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 MYF6P23409 242 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 FASP25445 335 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 ELK4P28324 431 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 PCSK6P29122 969 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 RBMS1P29558 406 aaKnown RBP5.62□□□□□ -1.51
ATM-229ENST00000639953 PKLRP30613 574 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 SLC5A2P31639 672 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 CSTF2P33240 577 aaKnown RBP eCLIP5.62□□□□□ -1.51
ATM-229ENST00000639953 DCTP40126 519 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 AVPR1BP47901 424 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 TRPC1P48995 793 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 CDK9P50750 372 aaKnown RBP5.62□□□□□ -1.51
ATM-229ENST00000639953 DAPP51397 102 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 HNRNPFP52597 415 aaKnown RBP5.62□□□□□ -1.51
ATM-229ENST00000639953 TAS2R50P59544 299 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 REEP5Q00765 189 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 MERTKQ12866 999 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 SRSF6Q13247 344 aaKnown RBP5.62□□□□□ -1.51
ATM-229ENST00000639953 TRA2AQ13595 282 aaKnown RBP eCLIP5.62□□□□□ -1.51
ATM-229ENST00000639953 TGIF1Q15583 401 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 CLPPQ16740 277 aaPredicted RBP5.62□□□□□ -1.51
ATM-229ENST00000639953 ST3GAL2Q16842 350 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 TBC1D25Q3MII6 688 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 LIN52Q52LA3 116 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 KIAA1614Q5VZ46 1190 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 ARMC6Q6NXE6 501 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 UNC5DQ6UXZ4 953 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 Q6ZPB1 254 aaPredicted RBP5.62□□□□□ -1.51
ATM-229ENST00000639953 PRSS42Q7Z5A4 293 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 WDR53Q7Z5U6 358 aaPredicted RBP5.62□□□□□ -1.51
ATM-229ENST00000639953 HMGN2P46Q86SG4 172 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 CCDC71Q8IV32 467 aaPredicted RBP5.62□□□□□ -1.51
ATM-229ENST00000639953 DCUN1D3Q8IWE4 304 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 BMPERQ8N8U9 685 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 SIMC1Q8NDZ2 872 aa5.62□□□□□ -1.51
ATM-229ENST00000639953 OR8J2Q8NGG1 315 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms