RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 TMEM41AQ96HV5 264 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 GPN2Q9H9Y4 310 aaPredicted RBP13.57□□□□□ -0.24
SCARB2-216ENST00000639300 RLIMQ9NVW2 624 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 NDUFAF4Q9P032 175 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 CA14Q9ULX7 337 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 ATG2BQ96BY7 2078 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.57□□□□□ -0.24
SCARB2-216ENST00000639300 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.57□□□□□ -0.24
SCARB2-216ENST00000639300 SLC19A2O60779 497 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 ZNF750Q32MQ0 723 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 FOXRED2Q8IWF2 684 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 MS4A15Q8N5U1 240 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 LRRC20Q8TCA0 184 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 DAZLQ92904 295 aaKnown RBP13.57□□□□□ -0.24
SCARB2-216ENST00000639300 MUL1Q969V5 352 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 NXPE3Q969Y0 559 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 SERINC2Q96SA4 455 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 MMP28Q9H239 520 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 TRPV4Q9HBA0 871 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 MED11Q9P086 117 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 GVINP1Q7Z2Y8 2422 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 SSC5DA1L4H1 1573 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 HYKKA2RU49 373 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 RFXAPO00287 272 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 CASC3O15234 703 aaKnown RBP13.57□□□□□ -0.24
SCARB2-216ENST00000639300 ZNF432O94892 652 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 PROS1P07225 676 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 ITGA5P08648 1049 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 MAPK14Q16539 360 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 DUSP7Q16829 419 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 TMEM69Q5SWH9 247 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 SFRP4Q6FHJ7 346 aaPredicted RBP13.57□□□□□ -0.24
SCARB2-216ENST00000639300 PRR22Q8IZ63 422 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 ZDHHC1Q8WTX9 485 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 CMKLR1Q99788 373 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 ORAI3Q9BRQ5 295 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 MBD2Q9UBB5 411 aa13.57□□□□□ -0.24
SCARB2-216ENST00000639300 L7N2F9 121 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 AP1G1O43747 822 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 FMO6PO60774 539 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 FBXO45P0C2W1 286 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 S1PR1P21453 382 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 ERV3-1Q14264 604 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.56□□□□□ -0.24
SCARB2-216ENST00000639300 LEG1Q6P5S2 330 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 CNIH2Q6PI25 160 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 KCTD18Q6PI47 426 aaPredicted RBP13.56□□□□□ -0.24
SCARB2-216ENST00000639300 GDPGP1Q6ZNW5 385 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 BCDIN3DQ7Z5W3 292 aaKnown RBP13.56□□□□□ -0.24
SCARB2-216ENST00000639300 ASCC1Q8N9N2 400 aaKnown RBP13.56□□□□□ -0.24
SCARB2-216ENST00000639300 PMM1Q92871 262 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 CHFRQ96EP1 664 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 CNN2Q99439 309 aaKnown RBP13.56□□□□□ -0.24
SCARB2-216ENST00000639300 ACSS1Q9NUB1 689 aaPredicted RBP13.56□□□□□ -0.24
SCARB2-216ENST00000639300 NAALAD2Q9Y3Q0 740 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 IER3IP1Q9Y5U9 82 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 LOXHD1Q8IVV2 1947 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 LILRB3O75022 631 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 HEXBP07686 556 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 RAB3BP20337 219 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 TNFSF8P32971 234 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 CAV3P56539 151 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 RPE65Q16518 533 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 SWI5Q1ZZU3 235 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 LHX8Q68G74 356 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 RHOXF1Q8NHV9 184 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 CASTOR1Q8WTX7 329 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 SPRYD4Q8WW59 207 aaPredicted RBP13.56□□□□□ -0.24
SCARB2-216ENST00000639300 CPNE5Q9HCH3 593 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 RXFP3Q9NSD7 469 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 NUFIP1Q9UHK0 495 aaKnown RBP13.56□□□□□ -0.24
SCARB2-216ENST00000639300 ZNF639Q9UID6 485 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 NOP16Q9Y3C1 178 aaKnown RBP13.56□□□□□ -0.24
SCARB2-216ENST00000639300 ADAMTSL1Q8N6G6 1762 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 PRSS38A1L453 326 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 GFRA2O00451 464 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 RBBP9O75884 186 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 KDM4BO94953 1096 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 PTTG1O95997 202 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 MAS1P04201 325 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 CBX5P45973 191 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 HENMT1Q5T8I9 393 aaKnown RBP13.56□□□□□ -0.24
SCARB2-216ENST00000639300 CHTF18Q8WVB6 975 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 OR4K3Q96R72 315 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 TMEM168Q9H0V1 697 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 CST11Q9H112 138 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 OR52D1Q9H346 318 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 DNAJC13O75165 2243 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 SLC9B1P1A6NJY1 282 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 MRPS14O60783 128 aaKnown RBP13.56□□□□□ -0.24
SCARB2-216ENST00000639300 RBMXL2O75526 392 aaKnown RBP13.56□□□□□ -0.24
SCARB2-216ENST00000639300 RGS9O75916 674 aaPredicted RBP13.56□□□□□ -0.24
SCARB2-216ENST00000639300 NDUFB2O95178 105 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 HCKP08631 526 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 FUT1P19526 365 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 CTGFP29279 349 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 GRM7Q14831 915 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 KIR2DS3Q14952 304 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 LTB4RQ15722 352 aa13.56□□□□□ -0.24
SCARB2-216ENST00000639300 ENTPD8Q5MY95 495 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms