RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 SERPINA12Q8IW75 414 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 PINK1Q9BXM7 581 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 B3GALT1Q9Y5Z6 326 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 KIAA0355O15063 1070 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 RAD1O60671 282 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 TSPAN15O95858 294 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 MT-ND4P03905 459 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 ZNF529Q6P280 563 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 GPR149Q86SP6 731 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 CHST14Q8NCH0 376 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 ACVR1CQ8NER5 493 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 SYNPRQ8TBG9 265 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 TGM7Q96PF1 710 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 PRDM9Q9NQV7 894 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 OR6C2Q9NZP2 312 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 PRAF2O60831 178 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 ZNF35P13682 527 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 C16orf58Q96GQ5 468 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 SORBS1Q9BX66 1292 aaKnown RBP17.48■□□□□ 0.39
SCARB2-213ENST00000638680 DMRT3Q9NQL9 472 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 REV1Q9UBZ9 1251 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 RNF215Q9Y6U7 377 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 ALDOCP09972 364 aaKnown RBP17.48■□□□□ 0.39
SCARB2-213ENST00000638680 IL1RNP18510 177 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 NKX3-2P78367 333 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 RAB40BQ12829 278 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 ELOCQ15369 112 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 PIP5KL1Q5T9C9 394 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 TMEM164Q5U3C3 297 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 OR9A2Q8NGT5 310 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 GMEB2Q9UKD1 530 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 LSM5Q9Y4Y9 91 aaKnown RBP17.48■□□□□ 0.39
SCARB2-213ENST00000638680 TP53I11O14683 189 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 NDUFB2O95178 105 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 KNG1P01042 644 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 SSTR2P30874 369 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 CXCR4P61073 352 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 MGAT3Q09327 533 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 SELPLGQ14242 412 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 GBX1Q14549 363 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 MAMDC2Q7Z304 686 aaPredicted RBP17.48■□□□□ 0.39
SCARB2-213ENST00000638680 DAZLQ92904 295 aaKnown RBP17.48■□□□□ 0.39
SCARB2-213ENST00000638680 TSACCQ96A04 125 aaPredicted RBP17.48■□□□□ 0.39
SCARB2-213ENST00000638680 PEX11GQ96HA9 241 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 C2orf42Q9NWW7 574 aa17.48■□□□□ 0.39
SCARB2-213ENST00000638680 MEIS3P1A6NDR6 274 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 GABRR3A8MPY1 467 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 MC3RP41968 323 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 RSU1Q15404 277 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 KCNJ8Q15842 424 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 SMN1Q16637 294 aaKnown RBP17.47■□□□□ 0.39
SCARB2-213ENST00000638680 FAM69AQ5T7M9 428 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 ALDH16A1Q8IZ83 802 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 TOR1AIP2Q8NFQ8 470 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 MUL1Q969V5 352 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 NPIPB15A6NHN6 443 aaPredicted RBP17.47■□□□□ 0.39
SCARB2-213ENST00000638680 MEIS3P2A8K0S8 358 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 NUPL2O15504 423 aaKnown RBP17.47■□□□□ 0.39
SCARB2-213ENST00000638680 LATO43561 262 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 RAB3DO95716 219 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 CSF1P09603 554 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 DDCP20711 480 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 CERS1P27544 350 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 CSNK2A1P68400 391 aaPredicted RBP17.47■□□□□ 0.39
SCARB2-213ENST00000638680 C1orf61Q13536 156 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 ELAVL3Q14576 367 aaKnown RBP17.47■□□□□ 0.39
SCARB2-213ENST00000638680 CSNK2A3Q8NEV1 391 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 TMEM185AQ8NFB2 350 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 CRYGNQ8WXF5 182 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 MFFQ9GZY8 342 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 SAP130Q9H0E3 1048 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 DDX31Q9H8H2 851 aaKnown RBP17.47■□□□□ 0.39
SCARB2-213ENST00000638680 HEBP1Q9NRV9 189 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 SLAMF8Q9P0V8 285 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 FAM221BA6H8Z2 402 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 CNOT4O95628 575 aaKnown RBP17.47■□□□□ 0.39
SCARB2-213ENST00000638680 CPOXP36551 454 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 LRRTM3Q86VH5 581 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 PIANPQ8IYJ0 282 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 OR14K1Q8NGZ2 314 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 MS4A4EQ96PG1 132 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 PEX12O00623 359 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 ZNF623O75123 536 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 IFNGR1P15260 489 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 OR5AR1Q8NGP9 310 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 PELOQ9BRX2 385 aaKnown RBP17.47■□□□□ 0.39
SCARB2-213ENST00000638680 CNOT2Q9NZN8 540 aaKnown RBP17.47■□□□□ 0.39
SCARB2-213ENST00000638680 MYH11P35749 1972 aa17.47■□□□□ 0.39
SCARB2-213ENST00000638680 TFAP2AP05549 437 aa17.46■□□□□ 0.39
SCARB2-213ENST00000638680 ACSM3Q53FZ2 586 aa17.46■□□□□ 0.39
SCARB2-213ENST00000638680 METTL4Q8N3J2 472 aa17.46■□□□□ 0.39
SCARB2-213ENST00000638680 GLYATL2Q8WU03 294 aa17.46■□□□□ 0.39
SCARB2-213ENST00000638680 TMEM40Q8WWA1 233 aa17.46■□□□□ 0.39
SCARB2-213ENST00000638680 SLC2A11Q9BYW1 496 aa17.46■□□□□ 0.39
SCARB2-213ENST00000638680 GIFP27352 417 aa17.46■□□□□ 0.39
SCARB2-213ENST00000638680 SDR9C7Q8NEX9 313 aa17.46■□□□□ 0.39
SCARB2-213ENST00000638680 RHOXF1Q8NHV9 184 aa17.46■□□□□ 0.39
SCARB2-213ENST00000638680 CLMPQ9H6B4 373 aa17.46■□□□□ 0.39
SCARB2-213ENST00000638680 BIN3Q9NQY0 253 aa17.46■□□□□ 0.39
SCARB2-213ENST00000638680 IL17CQ9P0M4 197 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms