RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 ZBED6CLQ96FA7 236 aaPredicted RBP16.07■□□□□ 0.16
PNKP-230ENST00000638016 PPP3R2Q96LZ3 170 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 SFXN2Q96NB2 322 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 ZIM3Q96PE6 472 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 CENPHQ9H3R5 247 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 FBXO34Q9NWN3 711 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 ATP6V1HQ9UI12 483 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 L3MBTL1Q9Y468 752 aa16.07■□□□□ 0.16
PNKP-230ENST00000638016 MBD3L4A6NDZ8 208 aaPredicted RBP16.06■□□□□ 0.16
PNKP-230ENST00000638016 MBD3L3A6NE82 208 aaPredicted RBP16.06■□□□□ 0.16
PNKP-230ENST00000638016 MBD3L5A6NJ08 208 aaPredicted RBP16.06■□□□□ 0.16
PNKP-230ENST00000638016 CD8B2A6NJW9 211 aa16.06■□□□□ 0.16
PNKP-230ENST00000638016 HSPB2A8KAH6 182 aa16.06■□□□□ 0.16
PNKP-230ENST00000638016 SHISA8B8ZZ34 492 aa16.06■□□□□ 0.16
PNKP-230ENST00000638016 H0YC42 278 aa16.06■□□□□ 0.16
PNKP-230ENST00000638016 CTIFO43310 598 aaKnown RBP16.06■□□□□ 0.16
PNKP-230ENST00000638016 UTS2O95399 124 aa16.06■□□□□ 0.16
PNKP-230ENST00000638016 UQCRC1P31930 480 aa16.06■□□□□ 0.16
PNKP-230ENST00000638016 TIMP3P35625 211 aa16.06■□□□□ 0.16
PNKP-230ENST00000638016 TPD52P55327 224 aaPredicted RBP16.06■□□□□ 0.16
PNKP-230ENST00000638016 CLDN18P56856 261 aa16.06■□□□□ 0.16
PNKP-230ENST00000638016 MYBPHQ13203 477 aa16.06■□□□□ 0.16
PNKP-230ENST00000638016 ZNHIT3Q15649 155 aaPredicted RBP16.06■□□□□ 0.16
PNKP-230ENST00000638016 HSPB2Q16082 182 aa16.06■□□□□ 0.16
PNKP-230ENST00000638016 PDCD2Q16342 344 aaPredicted RBP16.06■□□□□ 0.16
PNKP-230ENST00000638016 DUSP5Q16690 384 aa16.06■□□□□ 0.16
PNKP-230ENST00000638016 ATP6AP1LQ52LC2 224 aa16.06■□□□□ 0.16
PNKP-230ENST00000638016 CCNJQ5T5M9 372 aa16.06■□□□□ 0.16
PNKP-230ENST00000638016 ZNF781Q8N8C0 355 aa16.06■□□□□ 0.16
PNKP-230ENST00000638016 GATSQ8NAP1 163 aa16.06■□□□□ 0.16
PNKP-230ENST00000638016 FNDC5Q8NAU1 212 aa16.06■□□□□ 0.16
PNKP-230ENST00000638016 SLC16A11Q8NCK7 471 aa16.06■□□□□ 0.16
PNKP-230ENST00000638016 ZFP28Q8NHY6 868 aa16.06■□□□□ 0.16
PNKP-230ENST00000638016 MBD3L2Q8NHZ7 208 aaPredicted RBP16.06■□□□□ 0.16
PNKP-230ENST00000638016 GPR151Q8TDV0 419 aa16.06■□□□□ 0.16
PNKP-230ENST00000638016 SLC9A6Q92581 669 aa16.06■□□□□ 0.16
PNKP-230ENST00000638016 HOXB13Q92826 284 aaPredicted RBP16.06■□□□□ 0.16
PNKP-230ENST00000638016 MS4A4EQ96PG1 132 aa16.06■□□□□ 0.16
PNKP-230ENST00000638016 SH3GL2Q99962 352 aa16.06■□□□□ 0.16
PNKP-230ENST00000638016 KLHDC3Q9BQ90 382 aa16.06■□□□□ 0.16
PNKP-230ENST00000638016 MCCC2Q9HCC0 563 aa16.06■□□□□ 0.16
PNKP-230ENST00000638016 CLCA1A8K7I4 914 aa16.05■□□□□ 0.16
PNKP-230ENST00000638016 NKX2-2O95096 273 aa16.05■□□□□ 0.16
PNKP-230ENST00000638016 HSPA4LO95757 839 aa16.05■□□□□ 0.16
PNKP-230ENST00000638016 IL2RAP01589 272 aa16.05■□□□□ 0.16
PNKP-230ENST00000638016 CPN1P15169 458 aa16.05■□□□□ 0.16
PNKP-230ENST00000638016 SERPINB5P36952 375 aa16.05■□□□□ 0.16
PNKP-230ENST00000638016 HPCAL1P37235 193 aa16.05■□□□□ 0.16
PNKP-230ENST00000638016 ASMTP46597 345 aa16.05■□□□□ 0.16
PNKP-230ENST00000638016 RNF144AP50876 292 aaPredicted RBP16.05■□□□□ 0.16
PNKP-230ENST00000638016 MFSD12Q6NUT3 480 aa16.05■□□□□ 0.16
PNKP-230ENST00000638016 GCNT2Q8N0V5 402 aa16.05■□□□□ 0.16
PNKP-230ENST00000638016 PPP1R14CQ8TAE6 165 aa16.05■□□□□ 0.16
PNKP-230ENST00000638016 DUSP19Q8WTR2 217 aa16.05■□□□□ 0.16
PNKP-230ENST00000638016 NRGNQ92686 78 aa16.05■□□□□ 0.16
PNKP-230ENST00000638016 TUBGCP3Q96CW5 907 aa16.05■□□□□ 0.16
PNKP-230ENST00000638016 FAM120BQ96EK7 910 aaKnown RBP16.05■□□□□ 0.16
PNKP-230ENST00000638016 ACSS1Q9NUB1 689 aaPredicted RBP16.05■□□□□ 0.16
PNKP-230ENST00000638016 FAM120CQ9NX05 1096 aaKnown RBP16.05■□□□□ 0.16
PNKP-230ENST00000638016 ITGB1BP2Q9UKP3 347 aa16.05■□□□□ 0.16
PNKP-230ENST00000638016 ANKRD17O75179 2603 aaKnown RBP16.05■□□□□ 0.16
PNKP-230ENST00000638016 TEP1Q99973 2627 aaKnown RBP16.05■□□□□ 0.16
PNKP-230ENST00000638016 ENO4A6NNW6 628 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 TMEM114B3SHH9 223 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 FAM47E-STBD1D6RA91 191 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 DVL2O14641 736 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 C6orf47O95873 294 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 IFI6P09912 130 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 DHRS4L1P0CG22 281 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 G6PDP11413 515 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 ZNF708P17019 499 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 HK1P19367 917 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 BGNP21810 368 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 DGKQP52824 942 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 PSPHP78330 225 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 RCAN2Q14206 197 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 TNFAIP8L3Q5GJ75 292 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 RAET1LQ5VY80 246 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 ENPP6Q6UWR7 440 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 ARSKQ6UWY0 536 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 ADGRE4PQ86SQ3 457 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 ZZZ3Q8IYH5 903 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 UBQLNLQ8IYU4 475 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 OR4C3Q8NH37 302 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 ZPLD1Q8TCW7 415 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 JADE3Q92613 823 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 SORT1Q99523 831 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 NPAS1Q99742 590 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 ZNF559Q9BR84 538 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 CXorf36Q9H7Y0 433 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 ZCCHC3Q9NUD5 404 aaKnown RBP16.04■□□□□ 0.16
PNKP-230ENST00000638016 NTMQ9P121 344 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 CLCF1Q9UBD9 225 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 ABCG2Q9UNQ0 655 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 SNX8Q9Y5X2 465 aa16.04■□□□□ 0.16
PNKP-230ENST00000638016 A0A1W2PRB8 838 aa16.03■□□□□ 0.16
PNKP-230ENST00000638016 EEF1E1-BLOC1S5C9J1V9 151 aa16.03■□□□□ 0.16
PNKP-230ENST00000638016 EEF1E1O43324 174 aaKnown RBP16.03■□□□□ 0.16
PNKP-230ENST00000638016 EMC8O43402 210 aa16.03■□□□□ 0.16
PNKP-230ENST00000638016 KCNK2O95069 426 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms