RNA–Protein interactions for RNA: ENST00000637533.1

MECP2-222, Transcript of methyl-CpG binding protein 2, human

TSL 5

Gene MECP2, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MECP2-222	ENST00000637533	MRPS18A	Q9NVS2	196 aa	Known RBP	1.47	□□□□□ -2.17
MECP2-222	ENST00000637533	SMOX	Q9NWM0	555 aa		1.47	□□□□□ -2.17
MECP2-222	ENST00000637533	NDUFA13	Q9P0J0	144 aa		1.47	□□□□□ -2.17
MECP2-222	ENST00000637533	VAPA	Q9P0L0	249 aa		1.47	□□□□□ -2.17
MECP2-222	ENST00000637533	MYEF2	Q9P2K5	600 aa	Known RBP	1.47	□□□□□ -2.17
MECP2-222	ENST00000637533	SLC9A2	Q9UBY0	812 aa		1.47	□□□□□ -2.17
MECP2-222	ENST00000637533	MIOX	Q9UGB7	285 aa		1.47	□□□□□ -2.17
MECP2-222	ENST00000637533	SERGEF	Q9UGK8	458 aa		1.47	□□□□□ -2.17
MECP2-222	ENST00000637533	SHPK	Q9UHJ6	478 aa		1.47	□□□□□ -2.17
MECP2-222	ENST00000637533	ZNF639	Q9UID6	485 aa		1.47	□□□□□ -2.17
MECP2-222	ENST00000637533	PHF11	Q9UIL8	331 aa		1.47	□□□□□ -2.17
MECP2-222	ENST00000637533	GNPTG	Q9UJJ9	305 aa		1.47	□□□□□ -2.17
MECP2-222	ENST00000637533	PITPNC1	Q9UKF7	332 aa		1.47	□□□□□ -2.17
MECP2-222	ENST00000637533	PACSIN3	Q9UKS6	424 aa		1.47	□□□□□ -2.17
MECP2-222	ENST00000637533	PADI3	Q9ULW8	664 aa		1.47	□□□□□ -2.17
MECP2-222	ENST00000637533	WDR83OS	Q9Y284	106 aa		1.47	□□□□□ -2.17
MECP2-222	ENST00000637533	GSTK1	Q9Y2Q3	226 aa		1.47	□□□□□ -2.17
MECP2-222	ENST00000637533	SLC6A5	Q9Y345	797 aa		1.47	□□□□□ -2.17
MECP2-222	ENST00000637533	STARD10	Q9Y365	291 aa		1.47	□□□□□ -2.17
MECP2-222	ENST00000637533	TMED7	Q9Y3B3	224 aa		1.47	□□□□□ -2.17
MECP2-222	ENST00000637533	FADS3	Q9Y5Q0	445 aa		1.47	□□□□□ -2.17
MECP2-222	ENST00000637533	SYNJ2	O15056	1496 aa		1.47	□□□□□ -2.17
MECP2-222	ENST00000637533	AKNA	Q7Z591	1439 aa		1.47	□□□□□ -2.17
MECP2-222	ENST00000637533	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	1.47	□□□□□ -2.17
MECP2-222	ENST00000637533	MYO3B	Q8WXR4	1341 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	PCDH11Y	Q9BZA8	1340 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	IGLV5-45	A0A087WSX0	123 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	KCNE1B	A0A087WTH5	132 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533		A0A0U1RRA0	63 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	hDV102S1	A0JD36	115 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	GOLGA6L4	A6NEF3	574 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	ZNF503-AS2	A6NEH8	195 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	ANTXRL	A6NF34	631 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	MYMK	A6NI61	221 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	CCT8L1P	A6NM43	557 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	C12orf71	A8MTZ7	269 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533		B4DGG1	531 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	HHLA1	C9JL84	531 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	PRSS46	E5RG02	174 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533		H7C2Y5	167 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533		M0R036	132 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	PDLIM1	O00151	329 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	HAS3	O00219	553 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	CDC7	O00311	574 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	LIN7A	O14910	233 aa	Predicted RBP	1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	TCAP	O15273	167 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	ATP6V0E1	O15342	81 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	SLC16A4	O15374	487 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	CLOCK	O15516	846 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	CRX	O43186	299 aa	Predicted RBP	1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	SPRY1	O43609	319 aa	Predicted RBP	1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	OR1F1	O43749	312 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	DUX1	O43812	170 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	XPNPEP2	O43895	674 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	PCDH7	O60245	1069 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	CEACAM4	O75871	244 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	PDE5A	O76074	875 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	OR2F2	O95006	317 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	FARS2	O95363	451 aa	Known RBP	1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	PTBP3	O95758	552 aa	Known RBP	1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	EFEMP2	O95967	443 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	ASS1	P00966	412 aa	Known RBP	1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	IGHV4-39	P01824	125 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	HLA-H	P01893	362 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	FGF1	P05230	155 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	RHOC	P08134	193 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	MRPL3	P09001	348 aa	Known RBP	1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	CLTA	P09496	248 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	OR8G3P	P0DMU2	310 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	IGHV4-31	P0DP07	118 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	CALM1	P0DP23	149 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	CALM2	P0DP24	149 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	CALM3	P0DP25	149 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	SLC2A2	P11168	524 aa	Predicted RBP	1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	ANXA3	P12429	323 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	HPGD	P15428	266 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	GATA1	P15976	413 aa	Predicted RBP	1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	CYP11B2	P19099	503 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	POLR2E	P19388	210 aa	Known RBP	1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	FUT1	P19526	365 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	COX5A	P20674	150 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	EDN2	P20800	178 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	SERPINA2	P20848	420 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	STOM	P27105	288 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	PSMB9	P28065	219 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	GJB2	P29033	226 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	PRDX6	P30041	224 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	MAT2A	P31153	395 aa	Known RBP	1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	CA8	P35219	290 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	NAA10	P41227	235 aa	Predicted RBP	1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	OR3A1	P47881	315 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	NPBWR2	P48146	333 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	PGF	P49763	221 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	STK19	P49842	368 aa	Predicted RBP	1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	BCAP31	P51572	246 aa		1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	HNRNPM	P52272	730 aa	Known RBP eCLIP	1.46	□□□□□ -2.18	3e-7	■■■■□ 24.6
MECP2-222	ENST00000637533	RIDA	P52758	137 aa	Known RBP	1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	PSMD4	P55036	377 aa	Known RBP	1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	ADAR	P55265	1226 aa	Known RBP	1.46	□□□□□ -2.18
MECP2-222	ENST00000637533	SEC61G	P60059	68 aa		1.46	□□□□□ -2.18

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms