RNA–Protein interactions for RNA: ENST00000636351.1

CLN3-247, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 1,292 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-247ENST00000636351 MEMO1Q9Y316 297 aa16.32■□□□□ 0.2
CLN3-247ENST00000636351 CCDC154A6NI56 674 aa16.31■□□□□ 0.2
CLN3-247ENST00000636351 OR6C70A6NIJ9 312 aa16.31■□□□□ 0.2
CLN3-247ENST00000636351 TFECO14948 347 aaPredicted RBP16.31■□□□□ 0.2
CLN3-247ENST00000636351 NKX2-2O95096 273 aa16.31■□□□□ 0.2
CLN3-247ENST00000636351 CLDN14O95500 239 aa16.31■□□□□ 0.2
CLN3-247ENST00000636351 ANP32DO95626 131 aa16.31■□□□□ 0.2
CLN3-247ENST00000636351 PSMD4P55036 377 aaKnown RBP16.31■□□□□ 0.2
CLN3-247ENST00000636351 RPS26P62854 115 aaKnown RBP16.31■□□□□ 0.2
CLN3-247ENST00000636351 DUSP5Q16690 384 aa16.31■□□□□ 0.2
CLN3-247ENST00000636351 BICRALQ6AI39 1079 aa16.31■□□□□ 0.2
CLN3-247ENST00000636351 DESI1Q6ICB0 168 aa16.31■□□□□ 0.2
CLN3-247ENST00000636351 CDC73Q6P1J9 531 aa16.31■□□□□ 0.2
CLN3-247ENST00000636351 ZNF621Q6ZSS3 439 aa16.31■□□□□ 0.2
CLN3-247ENST00000636351 MSANTD1Q6ZTZ1 278 aa16.31■□□□□ 0.2
CLN3-247ENST00000636351 NUP54Q7Z3B4 507 aa16.31■□□□□ 0.2
CLN3-247ENST00000636351 SLC16A11Q8NCK7 471 aa16.31■□□□□ 0.2
CLN3-247ENST00000636351 ADAMTS15Q8TE58 950 aa16.31■□□□□ 0.2
CLN3-247ENST00000636351 TMCO6Q96DC7 493 aa16.31■□□□□ 0.2
CLN3-247ENST00000636351 ITCHQ96J02 903 aa16.31■□□□□ 0.2
CLN3-247ENST00000636351 SECISBP2Q96T21 854 aaKnown RBP16.31■□□□□ 0.2
CLN3-247ENST00000636351 SH2D2AQ9NP31 389 aa16.31■□□□□ 0.2
CLN3-247ENST00000636351 KLRF1Q9NZS2 232 aa16.31■□□□□ 0.2
CLN3-247ENST00000636351 CNOT11Q9UKZ1 510 aaKnown RBP16.31■□□□□ 0.2
CLN3-247ENST00000636351 BOKQ9UMX3 212 aaPredicted RBP16.31■□□□□ 0.2
CLN3-247ENST00000636351 EXPH5Q8NEV8 1989 aa16.31■□□□□ 0.2
CLN3-247ENST00000636351 POLQO75417 2590 aa16.31■□□□□ 0.2
CLN3-247ENST00000636351 PRAMEF25A6NGN4 478 aa16.3■□□□□ 0.2
CLN3-247ENST00000636351 ACOT7O00154 380 aa16.3■□□□□ 0.2
CLN3-247ENST00000636351 TSPAN2O60636 221 aa16.3■□□□□ 0.2
CLN3-247ENST00000636351 GSNP06396 782 aa16.3■□□□□ 0.2
CLN3-247ENST00000636351 ABOP16442 354 aa16.3■□□□□ 0.2
CLN3-247ENST00000636351 LSP1P33241 339 aa16.3■□□□□ 0.2
CLN3-247ENST00000636351 CDKN2CP42773 168 aa16.3■□□□□ 0.2
CLN3-247ENST00000636351 ZFP36L2P47974 494 aaKnown RBP16.3■□□□□ 0.2
CLN3-247ENST00000636351 MASP1P48740 699 aa16.3■□□□□ 0.2
CLN3-247ENST00000636351 HSF1Q00613 529 aa16.3■□□□□ 0.2
CLN3-247ENST00000636351 RCAN2Q14206 197 aa16.3■□□□□ 0.2
CLN3-247ENST00000636351 TBCELQ5QJ74 424 aa16.3■□□□□ 0.2
CLN3-247ENST00000636351 C6orf120Q7Z4R8 191 aa16.3■□□□□ 0.2
CLN3-247ENST00000636351 GALNT10Q86SR1 603 aa16.3■□□□□ 0.2
CLN3-247ENST00000636351 SIAH3Q8IW03 269 aa16.3■□□□□ 0.2
CLN3-247ENST00000636351 CDS1Q92903 461 aa16.3■□□□□ 0.2
CLN3-247ENST00000636351 HGDQ93099 445 aa16.3■□□□□ 0.2
CLN3-247ENST00000636351 SPDL1Q96EA4 605 aa16.3■□□□□ 0.2
CLN3-247ENST00000636351 SLC35A4Q96G79 324 aa16.3■□□□□ 0.2
CLN3-247ENST00000636351 ZNF597Q96LX8 424 aa16.3■□□□□ 0.2
CLN3-247ENST00000636351 NODALQ96S42 347 aa16.3■□□□□ 0.2
CLN3-247ENST00000636351 OSBPL11Q9BXB4 747 aa16.3■□□□□ 0.2
CLN3-247ENST00000636351 GPATCH2Q9NW75 528 aa16.3■□□□□ 0.2
CLN3-247ENST00000636351 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.3■□□□□ 0.2
CLN3-247ENST00000636351 F8P00451 2351 aa16.3■□□□□ 0.2
CLN3-247ENST00000636351 PKDREJQ9NTG1 2253 aa16.29■□□□□ 0.2
CLN3-247ENST00000636351 ADGRG4Q8IZF6 3080 aa16.29■□□□□ 0.2
CLN3-247ENST00000636351 PINLYPA6NC86 204 aa16.29■□□□□ 0.2
CLN3-247ENST00000636351 FAM166BA8MTA8 275 aa16.29■□□□□ 0.2
CLN3-247ENST00000636351 ASNA1O43681 348 aa16.29■□□□□ 0.2
CLN3-247ENST00000636351 CYP4B1P13584 511 aa16.29■□□□□ 0.2
CLN3-247ENST00000636351 MATN1P21941 496 aa16.29■□□□□ 0.2
CLN3-247ENST00000636351 SEC24CP53992 1094 aa16.29■□□□□ 0.2
CLN3-247ENST00000636351 PNLIPRP2P54317 469 aa16.29■□□□□ 0.2
CLN3-247ENST00000636351 CASP9P55211 416 aa16.29■□□□□ 0.2
CLN3-247ENST00000636351 RIPPLY3P57055 190 aa16.29■□□□□ 0.2
CLN3-247ENST00000636351 POU6F2P78424 691 aaPredicted RBP16.29■□□□□ 0.2
CLN3-247ENST00000636351 METTL21CQ5VZV1 264 aa16.29■□□□□ 0.2
CLN3-247ENST00000636351 TNFAIP8L2Q6P589 184 aaPredicted RBP16.29■□□□□ 0.2
CLN3-247ENST00000636351 FIGNL1Q6PIW4 674 aa16.29■□□□□ 0.2
CLN3-247ENST00000636351 FUNDC1Q8IVP5 155 aa16.29■□□□□ 0.2
CLN3-247ENST00000636351 GHDCQ8N2G8 530 aa16.29■□□□□ 0.2
CLN3-247ENST00000636351 OR5D16Q8NGK9 328 aa16.29■□□□□ 0.2
CLN3-247ENST00000636351 GOT1L1Q8NHS2 421 aaPredicted RBP16.29■□□□□ 0.2
CLN3-247ENST00000636351 HOXB13Q92826 284 aaPredicted RBP16.29■□□□□ 0.2
CLN3-247ENST00000636351 STACQ99469 402 aa16.29■□□□□ 0.2
CLN3-247ENST00000636351 DUSP22Q9NRW4 184 aa16.29■□□□□ 0.2
CLN3-247ENST00000636351 TUBA8Q9NY65 449 aaPredicted RBP16.29■□□□□ 0.2
CLN3-247ENST00000636351 DCHS2Q6V1P9 2916 aa16.29■□□□□ 0.2
CLN3-247ENST00000636351 TACC2O95359 2948 aa16.29■□□□□ 0.2
CLN3-247ENST00000636351 EML6Q6ZMW3 1958 aa16.28■□□□□ 0.2
CLN3-247ENST00000636351 AKAP9Q99996 3911 aa16.28■□□□□ 0.2
CLN3-247ENST00000636351 ICOSLGO75144 302 aa16.28■□□□□ 0.2
CLN3-247ENST00000636351 IL33O95760 270 aa16.28■□□□□ 0.2
CLN3-247ENST00000636351 SSTR2P30874 369 aa16.28■□□□□ 0.2
CLN3-247ENST00000636351 MAP3K8P41279 467 aa16.28■□□□□ 0.2
CLN3-247ENST00000636351 CASP3P42574 277 aa16.28■□□□□ 0.2
CLN3-247ENST00000636351 KHKP50053 298 aa16.28■□□□□ 0.2
CLN3-247ENST00000636351 KRTAP10-9P60411 292 aa16.28■□□□□ 0.2
CLN3-247ENST00000636351 PPIAP62937 165 aaKnown RBP16.28■□□□□ 0.2
CLN3-247ENST00000636351 CCNJQ5T5M9 372 aa16.28■□□□□ 0.2
CLN3-247ENST00000636351 SAXO2Q658L1 398 aa16.28■□□□□ 0.2
CLN3-247ENST00000636351 SLC2A7Q6PXP3 512 aa16.28■□□□□ 0.2
CLN3-247ENST00000636351 BLOC1S3Q6QNY0 202 aa16.28■□□□□ 0.2
CLN3-247ENST00000636351 C3P1Q6ZMU1 363 aa16.28■□□□□ 0.2
CLN3-247ENST00000636351 SPATA21Q7Z572 469 aa16.28■□□□□ 0.2
CLN3-247ENST00000636351 PACS2Q86VP3 889 aa16.28■□□□□ 0.2
CLN3-247ENST00000636351 SLC22A16Q86VW1 577 aa16.28■□□□□ 0.2
CLN3-247ENST00000636351 ZFP62Q8NB50 900 aaPredicted RBP16.28■□□□□ 0.2
CLN3-247ENST00000636351 C10orf82Q8WW14 230 aa16.28■□□□□ 0.2
CLN3-247ENST00000636351 NEURL3Q96EH8 262 aa16.28■□□□□ 0.2
CLN3-247ENST00000636351 OR7D2Q96RA2 312 aa16.28■□□□□ 0.2
CLN3-247ENST00000636351 BTBD2Q9BX70 525 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms