RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 IL23RQ5VWK5 629 aa16.7■□□□□ 0.26
CLN6-214ENST00000636314 OR5M10Q6IEU7 315 aa16.7■□□□□ 0.26
CLN6-214ENST00000636314 SEM1Q6ZVN7 128 aa16.7■□□□□ 0.26
CLN6-214ENST00000636314 CDRT4Q8N9R6 151 aa16.7■□□□□ 0.26
CLN6-214ENST00000636314 NUP43Q8NFH3 380 aa16.7■□□□□ 0.26
CLN6-214ENST00000636314 GPR151Q8TDV0 419 aa16.7■□□□□ 0.26
CLN6-214ENST00000636314 RMND5BQ96G75 393 aaPredicted RBP16.7■□□□□ 0.26
CLN6-214ENST00000636314 WDYHV1Q96HA8 205 aa16.7■□□□□ 0.26
CLN6-214ENST00000636314 SLC24A3Q9HC58 644 aa16.7■□□□□ 0.26
CLN6-214ENST00000636314 KCNK9Q9NPC2 374 aa16.7■□□□□ 0.26
CLN6-214ENST00000636314 DNAJB12Q9NXW2 375 aaKnown RBP16.7■□□□□ 0.26
CLN6-214ENST00000636314 ATP6V1HQ9UI12 483 aa16.7■□□□□ 0.26
CLN6-214ENST00000636314 ACTL7BQ9Y614 415 aa16.7■□□□□ 0.26
CLN6-214ENST00000636314 ITM2AO43736 263 aa16.69■□□□□ 0.26
CLN6-214ENST00000636314 EPPINO95925 133 aa16.69■□□□□ 0.26
CLN6-214ENST00000636314 CLK3P49761 638 aaKnown RBP16.69■□□□□ 0.26
CLN6-214ENST00000636314 GAS1P54826 345 aa16.69■□□□□ 0.26
CLN6-214ENST00000636314 WNT3P56703 355 aa16.69■□□□□ 0.26
CLN6-214ENST00000636314 ABCE1P61221 599 aaKnown RBP16.69■□□□□ 0.26
CLN6-214ENST00000636314 PPP2R2AP63151 447 aa16.69■□□□□ 0.26
CLN6-214ENST00000636314 PRR5P85299 388 aa16.69■□□□□ 0.26
CLN6-214ENST00000636314 STX5Q13190 355 aa16.69■□□□□ 0.26
CLN6-214ENST00000636314 RCAN2Q14206 197 aa16.69■□□□□ 0.26
CLN6-214ENST00000636314 PDCD2Q16342 344 aaPredicted RBP16.69■□□□□ 0.26
CLN6-214ENST00000636314 SLC25A35Q3KQZ1 300 aa16.69■□□□□ 0.26
CLN6-214ENST00000636314 TNFAIP8L3Q5GJ75 292 aa16.69■□□□□ 0.26
CLN6-214ENST00000636314 ENPP6Q6UWR7 440 aa16.69■□□□□ 0.26
CLN6-214ENST00000636314 ZNF781Q8N8C0 355 aa16.69■□□□□ 0.26
CLN6-214ENST00000636314 CHDHQ8NE62 594 aaPredicted RBP16.69■□□□□ 0.26
CLN6-214ENST00000636314 OR7A2PQ8NGA2 310 aa16.69■□□□□ 0.26
CLN6-214ENST00000636314 FBXO30Q8TB52 745 aa16.69■□□□□ 0.26
CLN6-214ENST00000636314 PIK3R3Q92569 461 aa16.69■□□□□ 0.26
CLN6-214ENST00000636314 SLC9A6Q92581 669 aa16.69■□□□□ 0.26
CLN6-214ENST00000636314 PGM2Q96G03 612 aa16.69■□□□□ 0.26
CLN6-214ENST00000636314 SFXN2Q96NB2 322 aa16.69■□□□□ 0.26
CLN6-214ENST00000636314 TRIB1Q96RU8 372 aa16.69■□□□□ 0.26
CLN6-214ENST00000636314 SDHAF3Q9NRP4 125 aa16.69■□□□□ 0.26
CLN6-214ENST00000636314 CCM2LQ9NUG4 571 aaPredicted RBP16.69■□□□□ 0.26
CLN6-214ENST00000636314 ATAD3AQ9NVI7 634 aa16.69■□□□□ 0.26
CLN6-214ENST00000636314 FAM120CQ9NX05 1096 aaKnown RBP16.69■□□□□ 0.26
CLN6-214ENST00000636314 FLRT3Q9NZU0 649 aa16.69■□□□□ 0.26
CLN6-214ENST00000636314 EIF3LQ9Y262 564 aaKnown RBP16.69■□□□□ 0.26
CLN6-214ENST00000636314 MED12Q93074 2177 aa16.68■□□□□ 0.26
CLN6-214ENST00000636314 KIAA1549Q9HCM3 1950 aa16.68■□□□□ 0.26
CLN6-214ENST00000636314 GXYLT2A0PJZ3 443 aa16.68■□□□□ 0.26
CLN6-214ENST00000636314 C17orf51A8MQB3 221 aa16.68■□□□□ 0.26
CLN6-214ENST00000636314 KDM4EB2RXH2 506 aaPredicted RBP16.68■□□□□ 0.26
CLN6-214ENST00000636314 H0Y3Z8 333 aa16.68■□□□□ 0.26
CLN6-214ENST00000636314 EMC8O43402 210 aa16.68■□□□□ 0.26
CLN6-214ENST00000636314 SNUPNO95149 360 aaKnown RBP16.68■□□□□ 0.26
CLN6-214ENST00000636314 DHRS4L1P0CG22 281 aa16.68■□□□□ 0.26
CLN6-214ENST00000636314 HOXB4P17483 251 aaPredicted RBP16.68■□□□□ 0.26
CLN6-214ENST00000636314 TCEA1P23193 301 aaKnown RBP16.68■□□□□ 0.26
CLN6-214ENST00000636314 DPP4P27487 766 aa16.68■□□□□ 0.26
CLN6-214ENST00000636314 MAD2L1Q13257 205 aaPredicted RBP16.68■□□□□ 0.26
CLN6-214ENST00000636314 MLC1Q15049 377 aa16.68■□□□□ 0.26
CLN6-214ENST00000636314 NSUN5P2Q63ZY6 315 aa16.68■□□□□ 0.26
CLN6-214ENST00000636314 AAGABQ6PD74 315 aa16.68■□□□□ 0.26
CLN6-214ENST00000636314 TGIF2LYQ8IUE0 185 aa16.68■□□□□ 0.26
CLN6-214ENST00000636314 LIX1LQ8IVB5 337 aa16.68■□□□□ 0.26
CLN6-214ENST00000636314 TRIM42Q8IWZ5 723 aa16.68■□□□□ 0.26
CLN6-214ENST00000636314 TNIP2Q8NFZ5 429 aa16.68■□□□□ 0.26
CLN6-214ENST00000636314 HOXB13Q92826 284 aaPredicted RBP16.68■□□□□ 0.26
CLN6-214ENST00000636314 PPP1R36Q96LQ0 422 aa16.68■□□□□ 0.26
CLN6-214ENST00000636314 FOXC2Q99958 501 aa16.68■□□□□ 0.26
CLN6-214ENST00000636314 TBL1XR1Q9BZK7 514 aa16.68■□□□□ 0.26
CLN6-214ENST00000636314 ZCCHC3Q9NUD5 404 aaKnown RBP16.68■□□□□ 0.26
CLN6-214ENST00000636314 NTMQ9P121 344 aa16.68■□□□□ 0.26
CLN6-214ENST00000636314 RAP2CQ9Y3L5 183 aa16.68■□□□□ 0.26
CLN6-214ENST00000636314 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.67■□□□□ 0.26
CLN6-214ENST00000636314 A0A1W2PRB8 838 aa16.67■□□□□ 0.26
CLN6-214ENST00000636314 CD8B2A6NJW9 211 aa16.67■□□□□ 0.26
CLN6-214ENST00000636314 FADS1O60427 444 aa16.67■□□□□ 0.26
CLN6-214ENST00000636314 ERLIN1O75477 346 aa16.67■□□□□ 0.26
CLN6-214ENST00000636314 NKX2-2O95096 273 aa16.67■□□□□ 0.26
CLN6-214ENST00000636314 UTS2O95399 124 aa16.67■□□□□ 0.26
CLN6-214ENST00000636314 IL2RAP01589 272 aa16.67■□□□□ 0.26
CLN6-214ENST00000636314 LAMP1P11279 417 aa16.67■□□□□ 0.26
CLN6-214ENST00000636314 PRPS1L1P21108 318 aa16.67■□□□□ 0.26
CLN6-214ENST00000636314 BGNP21810 368 aa16.67■□□□□ 0.26
CLN6-214ENST00000636314 TIMP3P35625 211 aa16.67■□□□□ 0.26
CLN6-214ENST00000636314 SLC1A6P48664 564 aa16.67■□□□□ 0.26
CLN6-214ENST00000636314 PRIM2P49643 509 aa16.67■□□□□ 0.26
CLN6-214ENST00000636314 GFRA1P56159 465 aa16.67■□□□□ 0.26
CLN6-214ENST00000636314 CPTPQ5TA50 214 aa16.67■□□□□ 0.26
CLN6-214ENST00000636314 MFSD12Q6NUT3 480 aa16.67■□□□□ 0.26
CLN6-214ENST00000636314 KIRREL3Q8IZU9 778 aa16.67■□□□□ 0.26
CLN6-214ENST00000636314 FADS6Q8N9I5 356 aa16.67■□□□□ 0.26
CLN6-214ENST00000636314 NAXEQ8NCW5 288 aa16.67■□□□□ 0.26
CLN6-214ENST00000636314 JADE3Q92613 823 aa16.67■□□□□ 0.26
CLN6-214ENST00000636314 FAM120BQ96EK7 910 aaKnown RBP16.67■□□□□ 0.26
CLN6-214ENST00000636314 GIMAP5Q96F15 307 aa16.67■□□□□ 0.26
CLN6-214ENST00000636314 PRPF18Q99633 342 aaKnown RBP16.67■□□□□ 0.26
CLN6-214ENST00000636314 PAIP2Q9BPZ3 127 aaKnown RBP16.67■□□□□ 0.26
CLN6-214ENST00000636314 DSN1Q9H410 356 aa16.67■□□□□ 0.26
CLN6-214ENST00000636314 ZNF395Q9H8N7 513 aaPredicted RBP16.67■□□□□ 0.26
CLN6-214ENST00000636314 SIRT3Q9NTG7 399 aaPredicted RBP16.67■□□□□ 0.26
CLN6-214ENST00000636314 NOP53Q9NZM5 478 aaKnown RBP16.67■□□□□ 0.26
CLN6-214ENST00000636314 RPH3AQ9Y2J0 694 aaPredicted RBP16.67■□□□□ 0.26
CLN6-214ENST00000636314 SNX8Q9Y5X2 465 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms