RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	CDNF	Q49AH0	187 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	PLPP4	Q5VZY2	271 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	RAET1G	Q6H3X3	334 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	SUSD1	Q6UWL2	747 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	TMEM91	Q6ZNR0	172 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	TMUB2	Q71RG4	321 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	ZNF551	Q7Z340	670 aa	Predicted RBP	10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	TSPAN33	Q86UF1	283 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	SPAG16	Q8N0X2	631 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	SYNPO	Q8N3V7	929 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	SLC44A3	Q8N4M1	653 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	MRPL43	Q8N983	215 aa	Known RBP	10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	GPR156	Q8NFN8	814 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	OR5M3	Q8NGP4	307 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	WFIKKN2	Q8TEU8	576 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	UBTD2	Q8WUN7	234 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	EDARADD	Q8WWZ3	215 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	CACNG6	Q9BXT2	260 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	NPDC1	Q9NQX5	325 aa	Predicted RBP	10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	THSD1	Q9NS62	852 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	TDP1	Q9NUW8	608 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	WBP1L	Q9NX94	342 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	ZDHHC3	Q9NYG2	299 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	ZNF624	Q9P2J8	865 aa	Predicted RBP	10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	EIF2B4	Q9UI10	523 aa	Known RBP	10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	SNX11	Q9Y5W9	270 aa		10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	SPIN1	Q9Y657	262 aa	Predicted RBP	10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	NUP210	Q8TEM1	1887 aa	Predicted RBP	10.12	□□□□□ -0.79
CHD2-223	ENST00000636306	TTLL8	A6PVC2	850 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	WASH3P	C4AMC7	463 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	PRAMEF2	O60811	474 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	STX11	O75558	287 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	RGS11	O94810	467 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	TF	P02787	698 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	NR2F6	P10588	404 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	POU3F2	P20265	443 aa	Predicted RBP	10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	GAL	P22466	123 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	ATP5A1	P25705	553 aa	Known RBP	10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	CNR2	P34972	360 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	KCNJ3	P48549	501 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	SELENOP	P49908	381 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	HMGA2	P52926	109 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	RPS25	P62851	125 aa	Known RBP	10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	RBBP4	Q09028	425 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	ARHGEF7	Q14155	803 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	ABRAXAS2	Q15018	415 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	SLC22A10	Q63ZE4	541 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	ZC3H14	Q6PJT7	736 aa	Known RBP	10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	ASB18	Q6ZVZ8	466 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	TRIM46	Q7Z4K8	759 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	PTOV1	Q86YD1	416 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	ADGRG2	Q8IZP9	1017 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	BPIFC	Q8NFQ6	507 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	OR6K2	Q8NGY2	324 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	RPLP0P6	Q8NHW5	317 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	CNOT9	Q92600	299 aa	Known RBP	10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	LMLN	Q96KR4	655 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	OR4K3	Q96R72	315 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	COPS8	Q99627	209 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	NIPSNAP1	Q9BPW8	284 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	INPP5K	Q9BT40	448 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	TSSK6	Q9BXA6	273 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	CIPC	Q9C0C6	399 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	QRSL1	Q9H0R6	528 aa	Known RBP	10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	ALX4	Q9H161	411 aa	Predicted RBP	10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	CDCP1	Q9H5V8	836 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	NSUN3	Q9H649	340 aa	Known RBP	10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	ZDHHC6	Q9H6R6	413 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	RDH14	Q9HBH5	336 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	LRTM1	Q9HBL6	345 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	SLC6A20	Q9NP91	592 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	SPHK2	Q9NRA0	654 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	ZFP57	Q9NU63	452 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	RPS6KB2	Q9UBS0	482 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	CA5B	Q9Y2D0	317 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	CHST2	Q9Y4C5	530 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	LOC390937	A0A1W2PQ73	354 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	TMEM129	A0AVI4	362 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	NCF1B	A6NI72	391 aa	Predicted RBP	10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	AGAP14	A8MT82	685 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	NCF1C	A8MVU1	366 aa	Predicted RBP	10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	NEDD8-MDP1	E9PL57	170 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	ZNF593	O00488	134 aa	Predicted RBP	10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	RFXANK	O14593	260 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	FFAR2	O15552	330 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	SUSD5	O60279	629 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	GALR3	O60755	368 aa	Predicted RBP	10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	CLDN7	O95471	211 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	LINC00271	P0C7V0	271 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	SPP1	P10451	314 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	HPGD	P15428	266 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	ELK1	P19419	428 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	PITPNB	P48739	271 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	VASP	P50552	380 aa	Predicted RBP	10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	WNT4	P56705	351 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	RPS14	P62263	151 aa	Known RBP	10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	MADCAM1	Q13477	382 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	SERTAD2	Q14140	314 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	UGT8	Q16880	541 aa		10.11	□□□□□ -0.79
CHD2-223	ENST00000636306	DUOXA1	Q1HG43	343 aa		10.11	□□□□□ -0.79

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