RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 OR5D16Q8NGK9 328 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 PLA2G12BQ9BX93 195 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 OBP2BQ9NPH6 170 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 FZD4Q9ULV1 537 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 PLLPQ9Y342 182 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 ARL2-SNX15V9GYD0 113 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 MAGI2Q86UL8 1455 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 EOMESO95936 686 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 WNT11O96014 354 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 CDH1P12830 882 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 DTYMKP23919 212 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 ADARB1P78563 741 aaKnown RBP5.73□□□□□ -1.49
SCN1A-212ENST00000636194 DHODHQ02127 395 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 TAF10Q12962 218 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 KCNC3Q14003 757 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 GK2Q14410 553 aaPredicted RBP5.73□□□□□ -1.49
SCN1A-212ENST00000636194 SLBPQ14493 270 aaKnown RBP eCLIP5.73□□□□□ -1.49
SCN1A-212ENST00000636194 C9orf152Q5JTZ5 239 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 DESI1Q6ICB0 168 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 XKR5Q6UX68 686 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 SPATC1Q76KD6 591 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 LGI4Q8N135 537 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 SVBPQ8N300 66 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 OR10R2Q8NGX6 335 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 SPOCK2Q92563 424 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 OR4C12Q96R67 309 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 GPR21Q99679 349 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 AP5S1Q9NUS5 200 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 RARRES3Q9UL19 164 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 CA14Q9ULX7 337 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 INSL6Q9Y581 213 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 USP42Q9H9J4 1324 aaKnown RBP5.73□□□□□ -1.49
SCN1A-212ENST00000636194 CNTNAP1P78357 1384 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 DUOX1Q9NRD9 1551 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 PXDNLA1KZ92 1463 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 SMIM35A0A1B0GVV1 85 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 TMEM88BA6NKF7 163 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 BCHEP06276 602 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 RNH1P13489 461 aaKnown RBP5.73□□□□□ -1.49
SCN1A-212ENST00000636194 IL4RP24394 825 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 HTRA4P83105 476 aaPredicted RBP5.73□□□□□ -1.49
SCN1A-212ENST00000636194 ZNF91Q05481 1191 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 TSGA10IPQ3SY00 556 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 HES5Q5TA89 166 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 C9orf57Q5W0N0 161 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 LRFN4Q6PJG9 635 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 TEX261Q6UWH6 196 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 SLC5A8Q8N695 610 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 CLSTN3Q9BQT9 956 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 NIPSNAP3BQ9BS92 247 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 PRTFDC1Q9NRG1 225 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 GAR1Q9NY12 217 aaKnown RBP5.73□□□□□ -1.49
SCN1A-212ENST00000636194 COQ3Q9NZJ6 369 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 KLHL9Q9P2J3 617 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 BOKQ9UMX3 212 aaPredicted RBP5.73□□□□□ -1.49
SCN1A-212ENST00000636194 U3KQ87 197 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 CNTNAP5Q8WYK1 1306 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 TOR1BO14657 336 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 ADAM20O43506 726 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 KCNQ2O43526 872 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 KCNK2O95069 426 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 CYP3A5P20815 502 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 NFYAP23511 347 aaPredicted RBP5.73□□□□□ -1.49
SCN1A-212ENST00000636194 GDI1P31150 447 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 BEX3Q00994 111 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 DDR1Q08345 913 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 FAM182BQ5T319 152 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 TPGS2Q68CL5 300 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 SLC27A4Q6P1M0 643 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 CD300LGQ6UXG3 332 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 OR6C4Q8NGE1 309 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 SH3YL1Q96HL8 342 aaPredicted RBP5.73□□□□□ -1.49
SCN1A-212ENST00000636194 ACSS3Q9H6R3 686 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 S100A14Q9HCY8 104 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 SALL1Q9NSC2 1324 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 DOCK3Q8IZD9 2030 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 SLC22A31A6NKX4 558 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 FAM170BA6NMN3 283 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 TRAPPC2LH3BP13 241 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 SAP18O00422 153 aaKnown RBP5.73□□□□□ -1.49
SCN1A-212ENST00000636194 SYT7O43581 403 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 LRCH4O75427 683 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 HTR3BO95264 441 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 ADPRHP54922 357 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 PLPPR4Q7Z2D5 763 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 OR2T4Q8NH00 348 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 OR8U1Q8NH10 309 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 COPS9Q8WXC6 57 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 DUSP23Q9BVJ7 150 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 NMES1Q9C002 83 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.73□□□□□ -1.49
SCN1A-212ENST00000636194 TMEM181Q9P2C4 612 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 SLC23A2Q9UGH3 650 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 A0A1W2PQH9 124 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 LRRC3CA6NJW4 275 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 DRGXA6NNA5 263 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 ECI2O75521 394 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 GALTP07902 379 aa5.73□□□□□ -1.49
SCN1A-212ENST00000636194 EIF2DP41214 584 aaKnown RBP5.73□□□□□ -1.49
SCN1A-212ENST00000636194 GABRA2P47869 451 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms