RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 PCDHA9Q9Y5H5 950 aa16.09■□□□□ 0.17
CLN6-212ENST00000636020 A0A0G2JK05 382 aa16.08■□□□□ 0.16
CLN6-212ENST00000636020 SHISA8B8ZZ34 492 aa16.08■□□□□ 0.16
CLN6-212ENST00000636020 FOXE1O00358 373 aaPredicted RBP16.08■□□□□ 0.16
CLN6-212ENST00000636020 ABCD4O14678 606 aa16.08■□□□□ 0.16
CLN6-212ENST00000636020 CXCL13O43927 109 aa16.08■□□□□ 0.16
CLN6-212ENST00000636020 ERAL1O75616 437 aaKnown RBP16.08■□□□□ 0.16
CLN6-212ENST00000636020 VENTXO95231 258 aa16.08■□□□□ 0.16
CLN6-212ENST00000636020 SYNGR4O95473 234 aa16.08■□□□□ 0.16
CLN6-212ENST00000636020 ADAP00813 363 aa16.08■□□□□ 0.16
CLN6-212ENST00000636020 APEHP13798 732 aaKnown RBP16.08■□□□□ 0.16
CLN6-212ENST00000636020 CDC25BP30305 580 aa16.08■□□□□ 0.16
CLN6-212ENST00000636020 ELK3P41970 407 aa16.08■□□□□ 0.16
CLN6-212ENST00000636020 EFNA4P52798 201 aa16.08■□□□□ 0.16
CLN6-212ENST00000636020 SLC12A2P55011 1212 aa16.08■□□□□ 0.16
CLN6-212ENST00000636020 MRPS22P82650 360 aaKnown RBP16.08■□□□□ 0.16
CLN6-212ENST00000636020 MGAT5Q09328 741 aa16.08■□□□□ 0.16
CLN6-212ENST00000636020 STX5Q13190 355 aa16.08■□□□□ 0.16
CLN6-212ENST00000636020 FRG1Q14331 258 aaKnown RBP16.08■□□□□ 0.16
CLN6-212ENST00000636020 LGSNQ5TDP6 509 aa16.08■□□□□ 0.16
CLN6-212ENST00000636020 CCDC137Q6PK04 289 aaKnown RBP16.08■□□□□ 0.16
CLN6-212ENST00000636020 NUFIP2Q7Z417 695 aaKnown RBP16.08■□□□□ 0.16
CLN6-212ENST00000636020 MUC15Q8N387 334 aa16.08■□□□□ 0.16
CLN6-212ENST00000636020 PPM1NQ8N819 430 aa16.08■□□□□ 0.16
CLN6-212ENST00000636020 BANPQ8N9N5 519 aa16.08■□□□□ 0.16
CLN6-212ENST00000636020 UHMK1Q8TAS1 419 aaKnown RBP16.08■□□□□ 0.16
CLN6-212ENST00000636020 DUSP19Q8WTR2 217 aa16.08■□□□□ 0.16
CLN6-212ENST00000636020 UBTD2Q8WUN7 234 aa16.08■□□□□ 0.16
CLN6-212ENST00000636020 VSTM2LQ96N03 204 aa16.08■□□□□ 0.16
CLN6-212ENST00000636020 NAP1L3Q99457 506 aaPredicted RBP16.08■□□□□ 0.16
CLN6-212ENST00000636020 DHRS9Q9BPW9 319 aa16.08■□□□□ 0.16
CLN6-212ENST00000636020 RHOJQ9H4E5 214 aa16.08■□□□□ 0.16
CLN6-212ENST00000636020 ANKRA2Q9H9E1 313 aa16.08■□□□□ 0.16
CLN6-212ENST00000636020 CAB39LQ9H9S4 337 aa16.08■□□□□ 0.16
CLN6-212ENST00000636020 SDHAF3Q9NRP4 125 aa16.08■□□□□ 0.16
CLN6-212ENST00000636020 CHMP2BQ9UQN3 213 aa16.08■□□□□ 0.16
CLN6-212ENST00000636020 GOLGA8QA0A0J9YX86 632 aa16.07■□□□□ 0.16
CLN6-212ENST00000636020 C1orf226A1L170 272 aa16.07■□□□□ 0.16
CLN6-212ENST00000636020 GOLGA8OA6NCC3 632 aa16.07■□□□□ 0.16
CLN6-212ENST00000636020 GOLGA8NF8WBI6 632 aa16.07■□□□□ 0.16
CLN6-212ENST00000636020 GOLGA8RI6L899 631 aa16.07■□□□□ 0.16
CLN6-212ENST00000636020 ADAMDEC1O15204 470 aa16.07■□□□□ 0.16
CLN6-212ENST00000636020 PHGDHO43175 533 aaKnown RBP16.07■□□□□ 0.16
CLN6-212ENST00000636020 SEMA3DO95025 777 aa16.07■□□□□ 0.16
CLN6-212ENST00000636020 KLK1P06870 262 aa16.07■□□□□ 0.16
CLN6-212ENST00000636020 NR4A2P43354 598 aa16.07■□□□□ 0.16
CLN6-212ENST00000636020 PSPHP78330 225 aa16.07■□□□□ 0.16
CLN6-212ENST00000636020 POU4F1Q01851 419 aa16.07■□□□□ 0.16
CLN6-212ENST00000636020 ITGADQ13349 1161 aa16.07■□□□□ 0.16
CLN6-212ENST00000636020 GTF2IRD2BQ6EKJ0 949 aa16.07■□□□□ 0.16
CLN6-212ENST00000636020 Q6ZSR9 355 aa16.07■□□□□ 0.16
CLN6-212ENST00000636020 GTF2IRD2Q86UP8 949 aa16.07■□□□□ 0.16
CLN6-212ENST00000636020 FBXL14Q8N1E6 418 aa16.07■□□□□ 0.16
CLN6-212ENST00000636020 TEX9Q8N6V9 391 aa16.07■□□□□ 0.16
CLN6-212ENST00000636020 OR4N2Q8NGD1 307 aa16.07■□□□□ 0.16
CLN6-212ENST00000636020 WDR20Q8TBZ3 569 aa16.07■□□□□ 0.16
CLN6-212ENST00000636020 ANP32BQ92688 251 aaKnown RBP16.07■□□□□ 0.16
CLN6-212ENST00000636020 RADILQ96JH8 1075 aa16.07■□□□□ 0.16
CLN6-212ENST00000636020 BCAS2O75934 225 aaPredicted RBP16.06■□□□□ 0.16
CLN6-212ENST00000636020 LY6HO94772 140 aa16.06■□□□□ 0.16
CLN6-212ENST00000636020 PPA1Q15181 289 aa16.06■□□□□ 0.16
CLN6-212ENST00000636020 CPSF6Q16630 551 aaKnown RBP eCLIP16.06■□□□□ 0.16
CLN6-212ENST00000636020 BHLHA15Q7RTS1 189 aaPredicted RBP16.06■□□□□ 0.16
CLN6-212ENST00000636020 WDR75Q8IWA0 830 aaKnown RBP16.06■□□□□ 0.16
CLN6-212ENST00000636020 SEMA6DQ8NFY4 1073 aa16.06■□□□□ 0.16
CLN6-212ENST00000636020 CNRIP1Q96F85 164 aaPredicted RBP16.06■□□□□ 0.16
CLN6-212ENST00000636020 ZNF681Q96N22 645 aa16.06■□□□□ 0.16
CLN6-212ENST00000636020 SERPINI1Q99574 410 aa16.06■□□□□ 0.16
CLN6-212ENST00000636020 NUDT4Q9NZJ9 180 aa16.06■□□□□ 0.16
CLN6-212ENST00000636020 NPAP1Q9NZP6 1156 aa16.06■□□□□ 0.16
CLN6-212ENST00000636020 FLRT3Q9NZU0 649 aa16.06■□□□□ 0.16
CLN6-212ENST00000636020 ADAM29Q9UKF5 820 aa16.06■□□□□ 0.16
CLN6-212ENST00000636020 ABCG2Q9UNQ0 655 aa16.06■□□□□ 0.16
CLN6-212ENST00000636020 MTO1Q9Y2Z2 717 aaKnown RBP16.06■□□□□ 0.16
CLN6-212ENST00000636020 IGHV4-61A0A0C4DH41 118 aa16.05■□□□□ 0.16
CLN6-212ENST00000636020 DNALI1O14645 258 aaPredicted RBP16.05■□□□□ 0.16
CLN6-212ENST00000636020 CTAGE8P0CG41 777 aa16.05■□□□□ 0.16
CLN6-212ENST00000636020 SRP14P37108 136 aaKnown RBP16.05■□□□□ 0.16
CLN6-212ENST00000636020 DEFA6Q01524 100 aa16.05■□□□□ 0.16
CLN6-212ENST00000636020 TMEM201Q5SNT2 666 aa16.05■□□□□ 0.16
CLN6-212ENST00000636020 CCNYL2Q5T2Q4 361 aa16.05■□□□□ 0.16
CLN6-212ENST00000636020 FAM180BQ6P0A1 224 aa16.05■□□□□ 0.16
CLN6-212ENST00000636020 SLC44A2Q8IWA5 706 aaPredicted RBP16.05■□□□□ 0.16
CLN6-212ENST00000636020 CTAGE4Q8IX94 777 aa16.05■□□□□ 0.16
CLN6-212ENST00000636020 OR2V1Q8NHB1 315 aa16.05■□□□□ 0.16
CLN6-212ENST00000636020 ZNF675Q8TD23 568 aa16.05■□□□□ 0.16
CLN6-212ENST00000636020 C3orf49Q96BT1 292 aa16.05■□□□□ 0.16
CLN6-212ENST00000636020 NXNL1Q96CM4 212 aa16.05■□□□□ 0.16
CLN6-212ENST00000636020 UBXN10Q96LJ8 280 aa16.05■□□□□ 0.16
CLN6-212ENST00000636020 TEX264Q9Y6I9 313 aa16.05■□□□□ 0.16
CLN6-212ENST00000636020 A0A0A6YYJ9 748 aa16.04■□□□□ 0.16
CLN6-212ENST00000636020 A0A0J9YW62 118 aa16.04■□□□□ 0.16
CLN6-212ENST00000636020 TMEM89A2RUT3 159 aa16.04■□□□□ 0.16
CLN6-212ENST00000636020 ZNF814B7Z6K7 855 aa16.04■□□□□ 0.16
CLN6-212ENST00000636020 SLCO1B7G3V0H7 640 aa16.04■□□□□ 0.16
CLN6-212ENST00000636020 UBXN8O00124 270 aa16.04■□□□□ 0.16
CLN6-212ENST00000636020 NDUFS8O00217 210 aa16.04■□□□□ 0.16
CLN6-212ENST00000636020 TNFSF11O14788 317 aa16.04■□□□□ 0.16
CLN6-212ENST00000636020 OPN1LWP04000 364 aa16.04■□□□□ 0.16
CLN6-212ENST00000636020 COL6A2P12110 1019 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms