RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 CHATP28329 748 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 BMI1P35226 326 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 ACVR1BP36896 505 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 DVL1P1P54792 670 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-209ENST00000635750 GNB2P62879 340 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF33AQ06730 810 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 CTSL3PQ5NE16 218 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 MEX3BQ6ZN04 569 aaKnown RBP5.27□□□□□ -1.57
SCN1A-209ENST00000635750 OR4K1Q8NGD4 311 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 SGK3Q96BR1 496 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 RBMXL1Q96E39 390 aaKnown RBP5.27□□□□□ -1.57
SCN1A-209ENST00000635750 UHRF2Q96PU4 802 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 NKX3-1Q99801 234 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-209ENST00000635750 TWSG1Q9GZX9 223 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 PISDQ9UG56 409 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 MEGF6O75095 1541 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 PMM2O15305 246 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 TNFSF12O43508 249 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 ETV3P41162 512 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 GCGRP47871 477 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 CD97P48960 835 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 SLC11A1P49279 550 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 RNF144AP50876 292 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-209ENST00000635750 NCS1P62166 190 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF542PQ5EBM4 170 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 SLC22A10Q63ZE4 541 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 TMEM150AQ86TG1 271 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 IL17RDQ8NFM7 739 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 OR4A16Q8NH70 328 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 ST7LQ8TDW4 575 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 KCNE4Q8WWG9 221 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 TANKQ92844 425 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 MTHFD2LQ9H903 347 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-209ENST00000635750 HSPB11Q9Y547 144 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 DEPDC5O75140 1603 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 KLRC4-KLRK1H3BQV0 150 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 AP1G1O43747 822 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 LILRB3O75022 631 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 PKLRP30613 574 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 SOX3P41225 446 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 VIPR2P41587 438 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 OR1E2P47887 323 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 AQP4P55087 323 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 UFM1P61960 85 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 CST9LP1Q5W188 147 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 SLC46A3Q7Z3Q1 461 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 SLC22A16Q86VW1 577 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 RBM12BQ8IXT5 1001 aaKnown RBP5.27□□□□□ -1.57
SCN1A-209ENST00000635750 BANPQ8N9N5 519 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 THOC3Q96J01 351 aaKnown RBP5.27□□□□□ -1.57
SCN1A-209ENST00000635750 MAELQ96JY0 434 aaKnown RBP5.27□□□□□ -1.57
SCN1A-209ENST00000635750 ZNF317Q96PQ6 595 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-209ENST00000635750 B3GAT1Q9P2W7 334 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 TESQ9UGI8 421 aaKnown RBP5.27□□□□□ -1.57
SCN1A-209ENST00000635750 DUOX1Q9NRD9 1551 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 SOBPA7XYQ1 873 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 SEC14L6B5MCN3 397 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 M0QZ24 198 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 GLCEO94923 617 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 AMY2AP04746 511 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 TBPP20226 339 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 SNCAP37840 140 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 RAD52P43351 418 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 TBPL1P62380 186 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 LMAN2Q12907 356 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 GPR17Q13304 367 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 SLC35G1Q2M3R5 365 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 LIPKQ5VXJ0 399 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 CNTN4Q8IWV2 1026 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 ESX1Q8N693 406 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 FAM174AQ8TBP5 190 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 ZFAND1Q8TCF1 268 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 MITD1Q8WV92 249 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 NXPE3Q969Y0 559 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 MRI1Q9BV20 369 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 TPSD1Q9BZJ3 242 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 POPDC3Q9HBV1 291 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 GPR83Q9NYM4 423 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 GALPQ9UBC7 116 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 POMPQ9Y244 141 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 B3GNT3Q9Y2A9 372 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 SLC35A3Q9Y2D2 325 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 SSUH2Q9Y2M2 353 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 FER1L6Q2WGJ9 1857 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 NPIPA5A0A0B4J1W7 369 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 TRBV11-1A0A0K0K1C0 115 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 NPIPA7E9PJI5 369 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 YKT6O15498 198 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 MRPL33O75394 65 aaKnown RBP5.27□□□□□ -1.57
SCN1A-209ENST00000635750 ZFAND5O76080 213 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 IGFBP1P08833 259 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-209ENST00000635750 NPIPA8P0DM63 369 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 SHC2P98077 582 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 MEF2AQ02078 507 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-209ENST00000635750 TGFBIQ15582 683 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 SOWAHAQ2M3V2 549 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 MANEALQ5VSG8 457 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 XKR5Q6UX68 686 aa5.27□□□□□ -1.57
SCN1A-209ENST00000635750 LRRC55Q6ZSA7 311 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms