RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 CLLU1OSQ5K130 101 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 GPR139Q6DWJ6 353 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 ASRGL1Q7L266 308 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 NRMQ8IXM6 262 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 SFXN5Q8TD22 340 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 MGLLQ99685 303 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 TMEM9Q9P0T7 183 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 BCL2A1Q16548 175 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 C6orf141Q5SZD1 244 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 HCAR1Q9BXC0 346 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 PCTPQ9UKL6 214 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 ERVK-19Q9WJR5 959 aa11.12□□□□□ -0.63
SHPRH-211ENST00000629427 ARGFXA6NJG6 315 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 OPN1LWP04000 364 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 PABPC4LP0CB38 370 aaKnown RBP11.11□□□□□ -0.63
SHPRH-211ENST00000629427 CHRNB4P30926 498 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 MZT1Q08AG7 82 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 SCAPQ12770 1279 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 COL1A1P02452 1464 aaPredicted RBP11.11□□□□□ -0.63
SHPRH-211ENST00000629427 CRABP1P29762 137 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 SGSHP51688 502 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 ERVPABLB-1P60509 514 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 RAB31Q13636 194 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 NPWQ8N729 165 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 TXNDC15Q96J42 360 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 ZNF778Q96MU6 729 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 RDH16O75452 317 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 MAP2K3P46734 347 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 SH3BP2P78314 561 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 SQSTM1Q13501 440 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 BLOC1S3Q6QNY0 202 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 OR8J1Q8NGP2 316 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 ANKRD34BA5PLL1 514 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 AMY2AP04746 511 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 CHRM4P08173 479 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 FDXRP22570 491 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 ZNF33BQ06732 778 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 C6orf183Q5T699 404 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 SLC35F2Q8IXU6 374 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 CMTM1Q8IZ96 169 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 VWA5B2Q8N398 1253 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 TANKQ92844 425 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 RNF38Q9H0F5 515 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 ZDHHC7Q9NXF8 308 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 TP53TG5Q9Y2B4 290 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 KCPQ6ZWJ8 1503 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 CD34P28906 385 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 GABRA2P47869 451 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 TDGQ13569 410 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 OR5M10Q6IEU7 315 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 SYNPO2LQ9H987 977 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 PELI2Q9HAT8 420 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 SLAMF7Q9NQ25 335 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 CCM2LQ9NUG4 571 aaPredicted RBP11.11□□□□□ -0.63
SHPRH-211ENST00000629427 PLEK2Q9NYT0 353 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 FAM230AA0A1W2PPH8 454 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 SLC9B1P1A6NJY1 282 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 MEIS3P2A8K0S8 358 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 WDPCPO95876 746 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 LUMP51884 338 aaPredicted RBP11.11□□□□□ -0.63
SHPRH-211ENST00000629427 ZNF181Q2M3W8 571 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 RNASE10Q5GAN6 216 aaKnown RBP11.11□□□□□ -0.63
SHPRH-211ENST00000629427 TMEM130Q8N3G9 435 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 KDM1BQ8NB78 822 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 FEVQ99581 238 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 MTG2Q9H4K7 406 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 TBCCD1Q9NVR7 557 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 TAS2R8Q9NYW2 309 aa11.11□□□□□ -0.63
SHPRH-211ENST00000629427 DDCP20711 480 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 IL32P24001 234 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 ITGB7P26010 798 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 HOXA11P31270 313 aaPredicted RBP11.1□□□□□ -0.63
SHPRH-211ENST00000629427 OR4D6Q8NGJ1 314 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 POC1BQ8TC44 478 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 RSC1A1Q92681 617 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 ULBP3Q9BZM4 244 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 GDE1Q9NZC3 331 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 VSX1Q9NZR4 365 aaPredicted RBP11.1□□□□□ -0.63
SHPRH-211ENST00000629427 PISDQ9UG56 409 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 TTC3P53804 2025 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 GLSO94925 669 aaPredicted RBP11.1□□□□□ -0.63
SHPRH-211ENST00000629427 RGS6P49758 472 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 ZNF136P52737 540 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 OR5D16Q8NGK9 328 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 FUBP1Q96AE4 644 aaKnown RBP11.1□□□□□ -0.63
SHPRH-211ENST00000629427 UHRF1Q96T88 793 aaPredicted RBP11.1□□□□□ -0.63
SHPRH-211ENST00000629427 SSX3Q99909 188 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 OR10A5Q9H207 317 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 OR10A2Q9H208 303 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 GPR83Q9NYM4 423 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 RABL2AQ9UBK7 228 aaPredicted RBP11.1□□□□□ -0.63
SHPRH-211ENST00000629427 ATPIF1Q9UII2 106 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 RABL2BQ9UNT1 228 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 HPRP00739 348 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 SERPINA5P05154 406 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 TNFRSF4P43489 277 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 CAMLGP49069 296 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 ERV3-1Q14264 604 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 EID2Q8N6I1 236 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 OR5L1Q8NGL2 311 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms