RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 C3orf18Q9UK00 162 aa7.84□□□□□ -1.15
SMN2-214ENST00000626847 ADAM18Q9Y3Q7 739 aa7.84□□□□□ -1.15
SMN2-214ENST00000626847 ERI2A8K979 691 aaKnown RBP7.83□□□□□ -1.16
SMN2-214ENST00000626847 CDRT15L2A8MXV6 281 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 C22orf46C9J442 243 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 M0R143 59 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 TP53I11O14683 189 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 HPGDSO60760 199 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 KHDRBS3O75525 346 aaKnown RBP7.83□□□□□ -1.16
SMN2-214ENST00000626847 BEST1O76090 585 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 ACSL3O95573 720 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 APOC3P02656 99 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 MT-ND5P03915 603 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 STAG3L2P0CL84 134 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 SCGB1A1P11684 91 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 MAGP20916 626 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 STOMP27105 288 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 ADORA2AP29274 412 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 GGT5P36269 586 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 THPOP40225 353 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 ARPP19P56211 112 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 WNT4P56705 351 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 EEFSECP57772 596 aaKnown RBP7.83□□□□□ -1.16
SMN2-214ENST00000626847 MC1RQ01726 317 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 GABPAQ06546 454 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 ELAVL2Q12926 359 aaKnown RBP7.83□□□□□ -1.16
SMN2-214ENST00000626847 CBFBQ13951 182 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 BSXQ3C1V8 233 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 SOWAHCQ53LP3 525 aaPredicted RBP7.83□□□□□ -1.16
SMN2-214ENST00000626847 NHLRC3Q5JS37 347 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 UBXN11Q5T124 520 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 RRAGBQ5VZM2 374 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 B3GNTL1Q67FW5 361 aaPredicted RBP7.83□□□□□ -1.16
SMN2-214ENST00000626847 RHBDF2Q6PJF5 856 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 HSDL2Q6YN16 418 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 TIPARPQ7Z3E1 657 aaKnown RBP7.83□□□□□ -1.16
SMN2-214ENST00000626847 ABHD12BQ7Z5M8 362 aaPredicted RBP7.83□□□□□ -1.16
SMN2-214ENST00000626847 NRARPQ7Z6K4 114 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 NAA40Q86UY6 237 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 VASH2Q86V25 355 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 PAQR7Q86WK9 346 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 SNX29P2Q8IUI4 249 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 FAM126BQ8IXS8 530 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 ZNF276Q8N554 614 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 RTL3Q8N8U3 475 aaKnown RBP7.83□□□□□ -1.16
SMN2-214ENST00000626847 ZNF557Q8N988 423 aaPredicted RBP7.83□□□□□ -1.16
SMN2-214ENST00000626847 AQP11Q8NBQ7 271 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 UXS1Q8NBZ7 420 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 KCTD6Q8NC69 237 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 OR6J1Q8NGC5 347 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 OR52N4Q8NGI2 321 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 OR8D4Q8NGM9 314 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 ZNF596Q8TC21 504 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 HGDQ93099 445 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 MRPL38Q96DV4 380 aaKnown RBP7.83□□□□□ -1.16
SMN2-214ENST00000626847 TMEM169Q96HH4 297 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 FCRL2Q96LA5 508 aaPredicted RBP7.83□□□□□ -1.16
SMN2-214ENST00000626847 SPATA13Q96N96 652 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 RBBP8Q99708 897 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 SLITRK2Q9H156 845 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 NT5DC2Q9H857 520 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 C3orf14Q9HBI5 128 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 CHST11Q9NPF2 352 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 MKKSQ9NPJ1 570 aaPredicted RBP7.83□□□□□ -1.16
SMN2-214ENST00000626847 ZNF302Q9NR11 478 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 ZNF701Q9NV72 531 aaPredicted RBP7.83□□□□□ -1.16
SMN2-214ENST00000626847 ERVK13-1Q9NX77 482 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 USE1Q9NZ43 259 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 USP36Q9P275 1121 aaKnown RBP7.83□□□□□ -1.16
SMN2-214ENST00000626847 RALYQ9UKM9 306 aaKnown RBP7.83□□□□□ -1.16
SMN2-214ENST00000626847 TBC1D24Q9ULP9 559 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 PADI2Q9Y2J8 665 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 VPS13AQ96RL7 3174 aa7.83□□□□□ -1.16
SMN2-214ENST00000626847 COL4A4P53420 1690 aaPredicted RBP7.83□□□□□ -1.16
SMN2-214ENST00000626847 GLYATL1P3A0A0U1RQE8 302 aa7.82□□□□□ -1.16
SMN2-214ENST00000626847 A8MV72 311 aaPredicted RBP7.82□□□□□ -1.16
SMN2-214ENST00000626847 PTGES3LE9PB15 166 aa7.82□□□□□ -1.16
SMN2-214ENST00000626847 H3BQ06 376 aaPredicted RBP7.82□□□□□ -1.16
SMN2-214ENST00000626847 AP4M1O00189 453 aa7.82□□□□□ -1.16
SMN2-214ENST00000626847 CLIC1O00299 241 aa7.82□□□□□ -1.16
SMN2-214ENST00000626847 SCAMP2O15127 329 aaKnown RBP7.82□□□□□ -1.16
SMN2-214ENST00000626847 ORC5O43913 435 aa7.82□□□□□ -1.16
SMN2-214ENST00000626847 CTDNEP1O95476 244 aa7.82□□□□□ -1.16
SMN2-214ENST00000626847 ESR1P03372 595 aa7.82□□□□□ -1.16
SMN2-214ENST00000626847 CLEC3BP05452 202 aa7.82□□□□□ -1.16
SMN2-214ENST00000626847 SLC35E2BP0CK96 405 aa7.82□□□□□ -1.16
SMN2-214ENST00000626847 SLC35E2P0CK97 266 aa7.82□□□□□ -1.16
SMN2-214ENST00000626847 CD8BP10966 210 aa7.82□□□□□ -1.16
SMN2-214ENST00000626847 G6PDP11413 515 aa7.82□□□□□ -1.16
SMN2-214ENST00000626847 NCF1P14598 390 aaPredicted RBP7.82□□□□□ -1.16
SMN2-214ENST00000626847 BCKDHBP21953 392 aa7.82□□□□□ -1.16
SMN2-214ENST00000626847 LHCGRP22888 699 aa7.82□□□□□ -1.16
SMN2-214ENST00000626847 PRKCHP24723 683 aa7.82□□□□□ -1.16
SMN2-214ENST00000626847 APEX1P27695 318 aaKnown RBP7.82□□□□□ -1.16
SMN2-214ENST00000626847 SFNP31947 248 aa7.82□□□□□ -1.16
SMN2-214ENST00000626847 RPA3P35244 121 aaPredicted RBP7.82□□□□□ -1.16
SMN2-214ENST00000626847 RPS20P60866 119 aaKnown RBP7.82□□□□□ -1.16
SMN2-214ENST00000626847 CDC42P60953 191 aa7.82□□□□□ -1.16
SMN2-214ENST00000626847 ARF3P61204 181 aaPredicted RBP7.82□□□□□ -1.16
SMN2-214ENST00000626847 SNRPD2P62316 118 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms