RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 SH2D4BQ5SQS7 431 aa9.9□□□□□ -0.82
DDX41-218ENST00000625286 SCIMPQ6UWF3 145 aa9.9□□□□□ -0.82
DDX41-218ENST00000625286 ZNF704Q6ZNC4 412 aaPredicted RBP9.9□□□□□ -0.82
DDX41-218ENST00000625286 PLEKHM3Q6ZWE6 761 aa9.9□□□□□ -0.82
DDX41-218ENST00000625286 FAM214BQ7L5A3 538 aa9.9□□□□□ -0.82
DDX41-218ENST00000625286 CHMP1BQ7LBR1 199 aa9.9□□□□□ -0.82
DDX41-218ENST00000625286 C17orf53Q8N3J3 647 aaPredicted RBP9.9□□□□□ -0.82
DDX41-218ENST00000625286 MEIOBQ8N635 442 aa9.9□□□□□ -0.82
DDX41-218ENST00000625286 GBP7Q8N8V2 638 aaPredicted RBP9.9□□□□□ -0.82
DDX41-218ENST00000625286 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.9□□□□□ -0.82
DDX41-218ENST00000625286 ADGRG7Q96K78 797 aa9.9□□□□□ -0.82
DDX41-218ENST00000625286 KCNA7Q96RP8 456 aa9.9□□□□□ -0.82
DDX41-218ENST00000625286 EBPLQ9BY08 206 aa9.9□□□□□ -0.82
DDX41-218ENST00000625286 RAB17Q9H0T7 212 aa9.9□□□□□ -0.82
DDX41-218ENST00000625286 GRPEL1Q9HAV7 217 aa9.9□□□□□ -0.82
DDX41-218ENST00000625286 PFDN4Q9NQP4 134 aa9.9□□□□□ -0.82
DDX41-218ENST00000625286 TMCO1Q9UM00 188 aa9.9□□□□□ -0.82
DDX41-218ENST00000625286 PROCRQ9UNN8 238 aa9.9□□□□□ -0.82
DDX41-218ENST00000625286 ZNF175Q9Y473 711 aa9.9□□□□□ -0.82
DDX41-218ENST00000625286 GXYLT2A0PJZ3 443 aa9.89□□□□□ -0.83
DDX41-218ENST00000625286 TRIM49D1C9J1S8 452 aa9.89□□□□□ -0.83
DDX41-218ENST00000625286 DLX3O60479 287 aa9.89□□□□□ -0.83
DDX41-218ENST00000625286 NTN1O95631 604 aa9.89□□□□□ -0.83
DDX41-218ENST00000625286 JUNP05412 331 aaKnown RBP9.89□□□□□ -0.83
DDX41-218ENST00000625286 COL6A2P12110 1019 aa9.89□□□□□ -0.83
DDX41-218ENST00000625286 KRT20P35900 424 aa9.89□□□□□ -0.83
DDX41-218ENST00000625286 BTKQ06187 659 aa9.89□□□□□ -0.83
DDX41-218ENST00000625286 ZNF844Q08AG5 666 aa9.89□□□□□ -0.83
DDX41-218ENST00000625286 CSTF3Q12996 717 aaKnown RBP9.89□□□□□ -0.83
DDX41-218ENST00000625286 ERCC6LQ2NKX8 1250 aa9.89□□□□□ -0.83
DDX41-218ENST00000625286 CYP27C1Q4G0S4 372 aa9.89□□□□□ -0.83
DDX41-218ENST00000625286 ZNF678Q5SXM1 525 aa9.89□□□□□ -0.83
DDX41-218ENST00000625286 MFSD12Q6NUT3 480 aa9.89□□□□□ -0.83
DDX41-218ENST00000625286 GALNT18Q6P9A2 607 aa9.89□□□□□ -0.83
DDX41-218ENST00000625286 TMEM107Q6UX40 140 aa9.89□□□□□ -0.83
DDX41-218ENST00000625286 ZNF572Q7Z3I7 529 aaPredicted RBP9.89□□□□□ -0.83
DDX41-218ENST00000625286 ATG4DQ86TL0 474 aaPredicted RBP9.89□□□□□ -0.83
DDX41-218ENST00000625286 RELL1Q8IUW5 271 aa9.89□□□□□ -0.83
DDX41-218ENST00000625286 FAM9CQ8IZT9 166 aa9.89□□□□□ -0.83
DDX41-218ENST00000625286 LRRN4CLQ8ND94 238 aa9.89□□□□□ -0.83
DDX41-218ENST00000625286 RAB3IL1Q8TBN0 382 aa9.89□□□□□ -0.83
DDX41-218ENST00000625286 TMEM237Q96Q45 408 aa9.89□□□□□ -0.83
DDX41-218ENST00000625286 PAFAH2Q99487 392 aa9.89□□□□□ -0.83
DDX41-218ENST00000625286 MRPL46Q9H2W6 279 aaKnown RBP9.89□□□□□ -0.83
DDX41-218ENST00000625286 GLIPR2Q9H4G4 154 aa9.89□□□□□ -0.83
DDX41-218ENST00000625286 TAS2R9Q9NYW1 312 aa9.89□□□□□ -0.83
DDX41-218ENST00000625286 TMEM216Q9P0N5 145 aa9.89□□□□□ -0.83
DDX41-218ENST00000625286 C19orf53Q9UNZ5 99 aaPredicted RBP9.89□□□□□ -0.83
DDX41-218ENST00000625286 OR10H1Q9Y4A9 318 aa9.89□□□□□ -0.83
DDX41-218ENST00000625286 TIMM22Q9Y584 194 aa9.89□□□□□ -0.83
DDX41-218ENST00000625286 NBEAL1Q6ZS30 2694 aa9.89□□□□□ -0.83
DDX41-218ENST00000625286 A0A087WV62 115 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 IGLV3-32A0A0A0MS00 114 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 GNG14A0A1W2PPG7 69 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 UBFD1O14562 309 aaKnown RBP9.88□□□□□ -0.83
DDX41-218ENST00000625286 ULK1O75385 1050 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 SUPT7LO94864 414 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 UTS2O95399 124 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 IL33O95760 270 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 HSD3B1P14060 373 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 IL11P20809 199 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 PSMA4P25789 261 aaKnown RBP9.88□□□□□ -0.83
DDX41-218ENST00000625286 HSD3B2P26439 372 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 GCAP28676 217 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 TIA1P31483 386 aaKnown RBP eCLIP9.88□□□□□ -0.83
DDX41-218ENST00000625286 MPIP34949 423 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 MAP3K8P41279 467 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 FOXA1P55317 472 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 EEFSECP57772 596 aaKnown RBP9.88□□□□□ -0.83
DDX41-218ENST00000625286 PPP2R2BQ00005 443 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 OCRLQ01968 901 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 ZNF155Q12901 538 aaPredicted RBP9.88□□□□□ -0.83
DDX41-218ENST00000625286 TSNAXIP1Q2TAA8 658 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 GRAMD1BQ3KR37 738 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 GLYR1Q49A26 553 aaPredicted RBP9.88□□□□□ -0.83
DDX41-218ENST00000625286 BEX5Q5H9J7 111 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 LGSNQ5TDP6 509 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 FAM71E1Q6IPT2 247 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 EXOC3L1Q86VI1 746 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 OR2L13Q8N349 312 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 METTL6Q8TCB7 284 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 NEUROG1Q92886 237 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 CAVIN3Q969G5 261 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 PLPPR2Q96GM1 343 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 ZNF382Q96SR6 550 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 CDC42EP4Q9H3Q1 356 aaKnown RBP9.88□□□□□ -0.83
DDX41-218ENST00000625286 NMRK1Q9NWW6 199 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 FAM120CQ9NX05 1096 aaKnown RBP9.88□□□□□ -0.83
DDX41-218ENST00000625286 SIRT5Q9NXA8 310 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 TAS2R7Q9NYW3 318 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 ABCG2Q9UNQ0 655 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 AP4B1Q9Y6B7 739 aa9.88□□□□□ -0.83
DDX41-218ENST00000625286 YLPM1P49750 1951 aaKnown RBP9.87□□□□□ -0.83
DDX41-218ENST00000625286 RNF223E7ERA6 249 aa9.87□□□□□ -0.83
DDX41-218ENST00000625286 LINC01387J3KSC0 135 aa9.87□□□□□ -0.83
DDX41-218ENST00000625286 OVOL3O00110 214 aa9.87□□□□□ -0.83
DDX41-218ENST00000625286 EIF1AYO14602 144 aaKnown RBP9.87□□□□□ -0.83
DDX41-218ENST00000625286 HS3ST1O14792 307 aa9.87□□□□□ -0.83
DDX41-218ENST00000625286 EFNA2O43921 213 aa9.87□□□□□ -0.83
DDX41-218ENST00000625286 SS18L1O75177 396 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms