RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 PMF1Q6P1K2 205 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 SLC27A4Q6P1M0 643 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 DLEU7Q6UYE1 221 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 CSGALNACT2Q8N6G5 542 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 RNF148Q8N7C7 305 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 OR52B4Q8NGK2 314 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 OR6T1Q8NGN1 323 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 CLHC1Q8NHS4 586 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 RAB3IL1Q8TBN0 382 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 LIPHQ8WWY8 451 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 SLCO4A1Q96BD0 722 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 BSCL2Q96G97 398 aaPredicted RBP3.19□□□□□ -1.9
BRCA1-229ENST00000621897 ANKRD27Q96NW4 1050 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 ZIM3Q96PE6 472 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 MTMR9Q96QG7 549 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 RANBP9Q96S59 729 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 ZNF607Q96SK3 696 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 FAM213AQ9BRX8 229 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 NTMT1Q9BV86 223 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 FICDQ9BVA6 458 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 FAM192AQ9GZU8 254 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 DDX47Q9H0S4 455 aaKnown RBP3.19□□□□□ -1.9
BRCA1-229ENST00000621897 TMEM245Q9H330 911 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 METTL7AQ9H8H3 244 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 SRD5A3Q9H8P0 318 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 SPACA1Q9HBV2 294 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 LZTFL1Q9NQ48 299 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 SLCO1C1Q9NYB5 712 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 CHMP5Q9NZZ3 219 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 DHRS4-AS1Q9P1J3 65 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 ANGPTL2Q9UKU9 493 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 MGAT4BQ9UQ53 548 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 NIP7Q9Y221 180 aaKnown RBP eCLIP3.19□□□□□ -1.9
BRCA1-229ENST00000621897 HBS1LQ9Y450 684 aaKnown RBP3.19□□□□□ -1.9
BRCA1-229ENST00000621897 COL16A1Q07092 1604 aaPredicted RBP3.19□□□□□ -1.9
BRCA1-229ENST00000621897 KIF27Q86VH2 1401 aa3.19□□□□□ -1.9
BRCA1-229ENST00000621897 TEX48A0A1B0GUV7 120 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 TTC26A0AVF1 554 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 HELTA6NFD8 242 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 OR6C65A6NJZ3 312 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 ACSL4O60488 711 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 CSDE1O75534 798 aaKnown RBP3.18□□□□□ -1.9
BRCA1-229ENST00000621897 GLCEO94923 617 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 LGI1O95970 557 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 CSTAP01040 98 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 IGHG3P01860 377 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 GIG44P09565 113 aaPredicted RBP3.18□□□□□ -1.9
BRCA1-229ENST00000621897 ANPEPP15144 967 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 RPA2P15927 270 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 ZNF19P17023 458 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 HNRNPFP52597 415 aaKnown RBP3.18□□□□□ -1.9
BRCA1-229ENST00000621897 LYZP61626 148 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 RPS27AP62979 156 aaKnown RBP3.18□□□□□ -1.9
BRCA1-229ENST00000621897 NUCB2P80303 420 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 LIPEQ05469 1076 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 RBBP4Q09028 425 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 PDK3Q15120 406 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 CHRNA6Q15825 494 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 C10orf120Q5SQS8 335 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 PAQR9Q6ZVX9 377 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 EFL1Q7Z2Z2 1120 aaKnown RBP3.18□□□□□ -1.9
BRCA1-229ENST00000621897 FAM228AQ86W67 206 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 CENPLQ8N0S6 344 aaPredicted RBP3.18□□□□□ -1.9
BRCA1-229ENST00000621897 TCAIMQ8N3R3 496 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 ZNRF1Q8ND25 227 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 OR8J1Q8NGP2 316 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 DDI1Q8WTU0 396 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 CYYR1Q96J86 154 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 PANX3Q96QZ0 392 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 LLPHQ9BRT6 129 aaKnown RBP3.18□□□□□ -1.9
BRCA1-229ENST00000621897 YTHDF1Q9BYJ9 559 aaKnown RBP3.18□□□□□ -1.9
BRCA1-229ENST00000621897 TSPYL1Q9H0U9 437 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 VCX3BQ9H321 246 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 AZI2Q9H6S1 392 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 SYNDIG1Q9H7V2 258 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 FN3KRPQ9HA64 309 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 MAGEF1Q9HAY2 307 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 KCNMB3Q9NPA1 279 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 IL26Q9NPH9 171 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 PEF1Q9UBV8 284 aaKnown RBP3.18□□□□□ -1.9
BRCA1-229ENST00000621897 ENTPD4Q9Y227 616 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 SH3GLB1Q9Y371 365 aa3.18□□□□□ -1.9
BRCA1-229ENST00000621897 SBNO1A3KN83 1393 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 KANK1Q14678 1352 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 FAM240BA0A1B0GVZ2 78 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 ANKDD1BA6NHY2 528 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 OR52A4PA6NMU1 304 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 KBTBD13C9JR72 458 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 LANCL1O43813 399 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 SNNO75324 88 aaPredicted RBP3.17□□□□□ -1.9
BRCA1-229ENST00000621897 WBP4O75554 376 aaKnown RBP3.17□□□□□ -1.9
BRCA1-229ENST00000621897 CRTAPO75718 401 aaPredicted RBP3.17□□□□□ -1.9
BRCA1-229ENST00000621897 SERPINA3P01011 423 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 CALCAP01258 141 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 FHP07954 510 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 ASNSP08243 561 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 SBK2P0C263 348 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 PRPS2P11908 318 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 ODC1P11926 461 aa3.17□□□□□ -1.9
BRCA1-229ENST00000621897 ZNF24P17028 368 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms