RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 RCBTB1Q8NDN9 531 aa6.82□□□□□ -1.32
COLCA1-205ENST00000620864 PGAM5Q96HS1 289 aa6.82□□□□□ -1.32
COLCA1-205ENST00000620864 OCSTAMPQ9BR26 566 aa6.82□□□□□ -1.32
COLCA1-205ENST00000620864 NICN1Q9BSH3 213 aa6.82□□□□□ -1.32
COLCA1-205ENST00000620864 THAP7Q9BT49 309 aaPredicted RBP6.82□□□□□ -1.32
COLCA1-205ENST00000620864 NSUN3Q9H649 340 aaKnown RBP6.82□□□□□ -1.32
COLCA1-205ENST00000620864 NANOGQ9H9S0 305 aa6.82□□□□□ -1.32
COLCA1-205ENST00000620864 KPTNQ9Y664 436 aa6.82□□□□□ -1.32
COLCA1-205ENST00000620864 NPIPA5A0A0B4J1W7 369 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 A6NHS1 94 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 TP53I11O14683 189 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 TNFP01375 233 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 MMP2P08253 660 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 CA5AP35218 305 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 STT3AP46977 705 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 BMXP51813 675 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 PRPS1P60891 318 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 ZNF266Q14584 549 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 ZMAT1Q5H9K5 638 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 SOHLH1Q5JUK2 328 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 PHYHD1Q5SRE7 291 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 PLEKHS1Q5SXH7 462 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 OR6C4Q8NGE1 309 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 TBC1D20Q96BZ9 403 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 C17orf62Q9BQA9 187 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 PAPOLGQ9BWT3 736 aaKnown RBP6.81□□□□□ -1.32
COLCA1-205ENST00000620864 HES7Q9BYE0 225 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 PCED1AQ9H1Q7 454 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 TMPRSS5Q9H3S3 457 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 C12orf10Q9HB07 376 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 POT1Q9NUX5 634 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 CCDC163A0A0D9SF12 145 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 DCDC2BA2VCK2 349 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 GJE1A6NN92 205 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 BLOC1S5-TXNDC5H3BN57 136 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 RTCAO00442 366 aaKnown RBP6.81□□□□□ -1.32
COLCA1-205ENST00000620864 FHP07954 510 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 VIPR1P32241 457 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 CSNK2A1P68400 391 aaPredicted RBP6.81□□□□□ -1.32
COLCA1-205ENST00000620864 DSC2Q02487 901 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 PLA2G7Q13093 441 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 EXOSC6Q5RKV6 272 aaKnown RBP6.81□□□□□ -1.32
COLCA1-205ENST00000620864 SLC6A19Q695T7 634 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 ZNF546Q86UE3 836 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 C1orf52Q8N6N3 182 aaKnown RBP6.81□□□□□ -1.32
COLCA1-205ENST00000620864 CSNK2A3Q8NEV1 391 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 OR5AK2Q8NH90 309 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 MR1Q95460 341 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 SIAEQ9HAT2 523 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 PPP1R14DQ9NXH3 145 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 UGT2A1Q9Y4X1 527 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 LDB2O43679 373 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 LALBAP00709 142 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 EGFP01133 1207 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 CA3P07451 260 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 EDNRBP24530 442 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 IL13RA1P78552 427 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 HMGCS1Q01581 520 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 TAP2Q03519 686 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 PMS2P3Q13401 168 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 NFATC2Q13469 925 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 SLC17A1Q14916 467 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 CNIH2Q6PI25 160 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 TSSK4Q6SA08 328 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 TMPPEQ6ZT21 453 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 SLC51BQ86UW2 128 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 SLC5A11Q8WWX8 675 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 PTCHD1Q96NR3 888 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 B3GNT5Q9BYG0 378 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 CD244Q9BZW8 370 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 ZDHHC7Q9NXF8 308 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 KLRF1Q9NZS2 232 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 LRP6O75581 1613 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 A0A1B0GVT2 93 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 NPIPA2E9PIF3 369 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 NPIPA3F8WFD2 350 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 H3BMQ9 156 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 AK4P27144 223 aaPredicted RBP6.81□□□□□ -1.32
COLCA1-205ENST00000620864 RFC3P40938 356 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 GPR176Q14439 515 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 HABP2Q14520 560 aaPredicted RBP6.81□□□□□ -1.32
COLCA1-205ENST00000620864 SLC2A7Q6PXP3 512 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 LINGO4Q6UY18 593 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 GOLGA7Q7Z5G4 137 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 SLC35B2Q8TB61 432 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 NANOS1Q8WY41 292 aaKnown RBP6.81□□□□□ -1.32
COLCA1-205ENST00000620864 MUL1Q969V5 352 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 NIFKQ9BYG3 293 aaKnown RBP6.81□□□□□ -1.32
COLCA1-205ENST00000620864 SLCO5A1Q9H2Y9 848 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 KCNK13Q9HB14 408 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 FMN2Q9NZ56 1722 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 A0A1W2PQH9 124 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 ARHGAP33O14559 1287 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 HLA-DOBP13765 273 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 RAB5AP20339 215 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 H3F3AP84243 136 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 MFGE8Q08431 387 aaPredicted RBP6.81□□□□□ -1.32
COLCA1-205ENST00000620864 RBMS2Q15434 407 aaKnown RBP6.81□□□□□ -1.32
COLCA1-205ENST00000620864 OR10K2Q6IF99 312 aa6.81□□□□□ -1.32
COLCA1-205ENST00000620864 PXT1Q8NFP0 134 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms