RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 SPHKAPQ2M3C7 1700 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 GPR171O14626 319 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 TERTO14746 1132 aaKnown RBP4.77□□□□□ -1.65
VPS13D-214ENST00000620676 CPN1P15169 458 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 PON3Q15166 354 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 MISPQ8IVT2 679 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 GPR26Q8NDV2 337 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 BSCL2Q96G97 398 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-214ENST00000620676 OR2AG1Q9H205 316 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 SLC9B1P1A6NJY1 282 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 TMEM200CA6NKL6 621 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 SOCS6O14544 535 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 OR8U9P0C7N5 309 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 ITPKBP27987 946 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 REPS2Q8NFH8 660 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 SAMD10Q9BYL1 202 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 RNF24Q9Y225 148 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 PCDHGA2Q9Y5H1 932 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 ZFP37Q9Y6Q3 630 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-214ENST00000620676 ADGRB2O60241 1585 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 GABARAPO95166 117 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 ALPPP05187 535 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 ZDHHC20Q5W0Z9 365 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 KIAA0930Q6ICG6 404 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-214ENST00000620676 ABHD13Q7L211 337 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 GLRX5Q86SX6 157 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 SP8Q8IXZ3 490 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 SLC44A3Q8N4M1 653 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 SMPDL3BQ92485 455 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 CHFRQ96EP1 664 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 LRIG1Q96JA1 1093 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 SLC5A7Q9GZV3 580 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 ITSN1Q15811 1721 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 SELENOPP49908 381 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 SLBPQ14493 270 aaKnown RBP eCLIP4.77□□□□□ -1.65
VPS13D-214ENST00000620676 B3GNT9Q6UX72 402 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 FBXO15Q8NCQ5 510 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-214ENST00000620676 OR10G6Q8NH81 332 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 MAP3K3Q99759 626 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 NIPSNAP1Q9BPW8 284 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 GAB2Q9UQC2 676 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 TNFSF13BQ9Y275 285 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 PTPRMP28827 1452 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 CPED1A4D0V7 1026 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 MSR1P21757 451 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 ZC3H3Q8IXZ2 948 aaKnown RBP4.77□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF596Q8TC21 504 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 P2RX7Q99572 595 aaKnown RBP4.77□□□□□ -1.65
VPS13D-214ENST00000620676 MRI1Q9BV20 369 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 CD244Q9BZW8 370 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 RNF39Q9H2S5 420 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 NDOR1Q9UHB4 597 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 DIP2CQ9Y2E4 1556 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 FGF1P05230 155 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 ITGA5P08648 1049 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 NID1P14543 1247 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 GZMKP49863 264 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 BIDP55957 195 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 RAP1AP62834 184 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 HAGHQ16775 308 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 UPP1Q16831 310 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 REEP3Q6NUK4 255 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 OR13C9Q8NGT0 318 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 SCARB1Q8WTV0 552 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 ZDHHC12Q96GR4 267 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF582Q96NG8 517 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-214ENST00000620676 DPYSL5Q9BPU6 564 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 C11orf84Q9BUA3 381 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-214ENST00000620676 ALG8Q9BVK2 526 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 GHRLQ9UBU3 117 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 MYO10Q9HD67 2058 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 TRAV34A0A0B4J273 112 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 IMPA2O14732 288 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 SIGLEC6O43699 453 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 AKR7A3O95154 331 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 CATP04040 527 aaKnown RBP4.77□□□□□ -1.65
VPS13D-214ENST00000620676 SERPINA2P20848 420 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 FXYD4P59646 89 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 FABP9Q0Z7S8 132 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 NBPF12Q5TAG4 269 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-214ENST00000620676 FAM46CQ5VWP2 391 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 MED27Q6P2C8 311 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 NLGN1Q8N2Q7 840 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 ADAMTS15Q8TE58 950 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 NECAB3Q96P71 396 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-214ENST00000620676 KCNJ16Q9NPI9 418 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 FAM198AQ9UFP1 575 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 NDUFS6O75380 124 aaKnown RBP4.77□□□□□ -1.65
VPS13D-214ENST00000620676 CSO75390 466 aaKnown RBP4.77□□□□□ -1.65
VPS13D-214ENST00000620676 SLC2A5P22732 501 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 PIN1Q13526 163 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-214ENST00000620676 C2orf76Q3KRA6 126 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 MAMDC4Q6UXC1 1216 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 FAM122BQ7Z309 247 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 OR52E4Q8NGH9 312 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 OR13C5Q8NGS8 318 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 OR13C2Q8NGS9 318 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 MZB1Q8WU39 189 aa4.77□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF578Q96N58 590 aaPredicted RBP4.77□□□□□ -1.65
VPS13D-214ENST00000620676 OR6C68A6NDL8 312 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms