RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 RB1P06400 928 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 CKBP12277 381 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 GIFP27352 417 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 MAPK3P27361 379 aaPredicted RBP9.75□□□□□ -0.85
VPS11-207ENST00000620429 IRS1P35568 1242 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 OR1G1P47890 313 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 HTR5AP47898 357 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 RBP2P50120 134 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 CDH4P55283 916 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 E2F1Q01094 437 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 PDZK1IP1Q13113 114 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 KRT33BQ14525 404 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 MINDY4Q4G0A6 757 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 CTSL3PQ5NE16 218 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 TMEM201Q5SNT2 666 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 MANEAQ5SRI9 462 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 GCNT6Q5T4J0 391 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 RPL13AP3Q6NVV1 102 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 CD200R1LQ6Q8B3 271 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 LRRN1Q6UXK5 716 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 DEF8Q6ZN54 512 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 MOB3CQ70IA8 216 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 ANKRD46Q86W74 232 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 ZNF683Q8IZ20 524 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 POMGNT2Q8NAT1 580 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 STK35Q8TDR2 534 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 OR2A7Q96R45 310 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 OR4K3Q96R72 315 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 TMEM184CQ9NVA4 438 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 NLGN3Q9NZ94 848 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 RPS6KB2Q9UBS0 482 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 SNX11Q9Y5W9 270 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 LTBP2Q14767 1821 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 OR2M5A3KFT3 312 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 ZAR1LA6NP61 321 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 TNFRSF11BO00300 401 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 TNFRSF10BO14763 440 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 TCAPO15273 167 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 GUCA1CO95843 209 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 SOD1P00441 154 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 RAB4AP20338 218 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 GATMP50440 423 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 FABP9Q0Z7S8 132 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 MAD2L1Q13257 205 aaPredicted RBP9.75□□□□□ -0.85
VPS11-207ENST00000620429 SERINC3Q13530 473 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 PTGES3Q15185 160 aaKnown RBP9.75□□□□□ -0.85
VPS11-207ENST00000620429 CRTC2Q53ET0 693 aaPredicted RBP9.75□□□□□ -0.85
VPS11-207ENST00000620429 FBXL22Q6P050 247 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 FAM111BQ6SJ93 734 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 LYPD4Q6UWN0 246 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 LAPTM4BQ86VI4 370 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 LRRC28Q86X40 367 aaPredicted RBP9.75□□□□□ -0.85
VPS11-207ENST00000620429 SLITRK4Q8IW52 837 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 THEM5Q8N1Q8 247 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 C11orf65Q8NCR3 313 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 TMEM203Q969S6 136 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 C12orf66Q96MD2 445 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 NIPSNAP1Q9BPW8 284 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 GGACTQ9BVM4 153 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 CLMPQ9H6B4 373 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 RASL12Q9NYN1 266 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 FKBPLQ9UIM3 349 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 SLC9A8Q9Y2E8 581 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 CCL27Q9Y4X3 112 aa9.75□□□□□ -0.85
VPS11-207ENST00000620429 COL4A4P53420 1690 aaPredicted RBP9.74□□□□□ -0.85
VPS11-207ENST00000620429 TMEM200CA6NKL6 621 aa9.74□□□□□ -0.85
VPS11-207ENST00000620429 PSMD9O00233 223 aa9.74□□□□□ -0.85
VPS11-207ENST00000620429 IGHV2-5P01817 119 aa9.74□□□□□ -0.85
VPS11-207ENST00000620429 HIST1H2ABP04908 130 aa9.74□□□□□ -0.85
VPS11-207ENST00000620429 ALPIP09923 528 aa9.74□□□□□ -0.85
VPS11-207ENST00000620429 RD3LP0DJH9 198 aa9.74□□□□□ -0.85
VPS11-207ENST00000620429 RBMS1P29558 406 aaKnown RBP9.74□□□□□ -0.85
VPS11-207ENST00000620429 OR1E1P30953 314 aa9.74□□□□□ -0.85
VPS11-207ENST00000620429 MC4RP32245 332 aa9.74□□□□□ -0.85
VPS11-207ENST00000620429 CLDN8P56748 225 aa9.74□□□□□ -0.85
VPS11-207ENST00000620429 C21orf58P58505 322 aa9.74□□□□□ -0.85
VPS11-207ENST00000620429 SNRPGP62308 76 aaKnown RBP9.74□□□□□ -0.85
VPS11-207ENST00000620429 RPS25P62851 125 aaKnown RBP9.74□□□□□ -0.85
VPS11-207ENST00000620429 RAC1P63000 192 aa9.74□□□□□ -0.85
VPS11-207ENST00000620429 EFEMP1Q12805 493 aa9.74□□□□□ -0.85
VPS11-207ENST00000620429 HTR4Q13639 388 aa9.74□□□□□ -0.85
VPS11-207ENST00000620429 TPBGQ13641 420 aa9.74□□□□□ -0.85
VPS11-207ENST00000620429 PCBP2Q15366 365 aaKnown RBP eCLIP9.74□□□□□ -0.85
VPS11-207ENST00000620429 USP30Q70CQ3 517 aa9.74□□□□□ -0.85
VPS11-207ENST00000620429 HIST3H2AQ7L7L0 130 aa9.74□□□□□ -0.85
VPS11-207ENST00000620429 ZNF551Q7Z340 670 aaPredicted RBP9.74□□□□□ -0.85
VPS11-207ENST00000620429 FAM71CQ8NEG0 241 aa9.74□□□□□ -0.85
VPS11-207ENST00000620429 OR4C15Q8NGM1 316 aa9.74□□□□□ -0.85
VPS11-207ENST00000620429 OR5M3Q8NGP4 307 aa9.74□□□□□ -0.85
VPS11-207ENST00000620429 OR6K3Q8NGY3 331 aa9.74□□□□□ -0.85
VPS11-207ENST00000620429 SP7Q8TDD2 431 aaPredicted RBP9.74□□□□□ -0.85
VPS11-207ENST00000620429 HIST1H2ACQ93077 130 aa9.74□□□□□ -0.85
VPS11-207ENST00000620429 C1GALT1C1Q96EU7 318 aa9.74□□□□□ -0.85
VPS11-207ENST00000620429 POLDIP3Q9BY77 421 aaKnown RBP9.74□□□□□ -0.85
VPS11-207ENST00000620429 ARL6Q9H0F7 186 aa9.74□□□□□ -0.85
VPS11-207ENST00000620429 CHRDQ9H2X0 955 aa9.74□□□□□ -0.85
VPS11-207ENST00000620429 BPIFA1Q9NP55 256 aa9.74□□□□□ -0.85
VPS11-207ENST00000620429 ISYNA1Q9NPH2 558 aa9.74□□□□□ -0.85
VPS11-207ENST00000620429 RLIMQ9NVW2 624 aa9.74□□□□□ -0.85
VPS11-207ENST00000620429 ACSL6Q9UKU0 697 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms