RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 PSMD4P55036 377 aaKnown RBP7.4□□□□□ -1.22
CPNE3-209ENST00000620393 NRG3P56975 720 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 SOX8P57073 446 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 MLF1P58340 268 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 SELENOWP63302 87 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 CHAF1BQ13112 559 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 AIMP2Q13155 320 aaKnown RBP7.4□□□□□ -1.22
CPNE3-209ENST00000620393 SRSF6Q13247 344 aaKnown RBP7.4□□□□□ -1.22
CPNE3-209ENST00000620393 GPR68Q15743 365 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 NNATQ16517 81 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.4□□□□□ -1.22
CPNE3-209ENST00000620393 CYBRD1Q53TN4 286 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 RPS26P11Q5JNZ5 115 aaPredicted RBP7.4□□□□□ -1.22
CPNE3-209ENST00000620393 DCAF10Q5QP82 559 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 JMJD6Q6NYC1 403 aaPredicted RBP7.4□□□□□ -1.22
CPNE3-209ENST00000620393 FRRS1Q6ZNA5 592 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 C16orf47Q6ZP98 133 aaPredicted RBP7.4□□□□□ -1.22
CPNE3-209ENST00000620393 ZAR1Q86SH2 424 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 SPATA24Q86W54 205 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 RPS19BP1Q86WX3 136 aaKnown RBP7.4□□□□□ -1.22
CPNE3-209ENST00000620393 PEX5LQ8IYB4 626 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 SLC34A3Q8N130 599 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 ZNF619Q8N2I2 560 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 TMEM102Q8N9M5 508 aaPredicted RBP7.4□□□□□ -1.22
CPNE3-209ENST00000620393 OR52P1PQ8NH57 321 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 SPPL2AQ8TCT8 520 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 SLC26A7Q8TE54 656 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 THAP3Q8WTV1 239 aaPredicted RBP7.4□□□□□ -1.22
CPNE3-209ENST00000620393 CANT1Q8WVQ1 401 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 PSMF1Q92530 271 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 DIO2Q92813 273 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 TMBIM1Q969X1 311 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 TAMM41Q96BW9 452 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 DUS3LQ96G46 650 aaKnown RBP7.4□□□□□ -1.22
CPNE3-209ENST00000620393 NAF1Q96HR8 494 aaKnown RBP7.4□□□□□ -1.22
CPNE3-209ENST00000620393 PYURFQ96I23 114 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 RNF145Q96MT1 663 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 COL21A1Q96P44 957 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 CCNL2Q96S94 520 aaPredicted RBP7.4□□□□□ -1.22
CPNE3-209ENST00000620393 RSPO3Q9BXY4 272 aaPredicted RBP7.4□□□□□ -1.22
CPNE3-209ENST00000620393 HOXD1Q9GZZ0 328 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 CDCP1Q9H5V8 836 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 CCDC86Q9H6F5 360 aaKnown RBP7.4□□□□□ -1.22
CPNE3-209ENST00000620393 CCM2LQ9NUG4 571 aaPredicted RBP7.4□□□□□ -1.22
CPNE3-209ENST00000620393 ADPRHL2Q9NX46 363 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 RPS6KA6Q9UK32 745 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 ZNF232Q9UNY5 417 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 SAMD4AQ9UPU9 718 aaKnown RBP7.4□□□□□ -1.22
CPNE3-209ENST00000620393 YARS2Q9Y2Z4 477 aaKnown RBP7.4□□□□□ -1.22
CPNE3-209ENST00000620393 IFT52Q9Y366 437 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 NPFFR2Q9Y5X5 522 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 GPC6Q9Y625 555 aaPredicted RBP7.4□□□□□ -1.22
CPNE3-209ENST00000620393 DSPPQ9NZW4 1301 aa7.4□□□□□ -1.22
CPNE3-209ENST00000620393 WDFY3Q8IZQ1 3526 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 SCN2AQ99250 2005 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 PTPRBP23467 1997 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 OR6C70A6NIJ9 312 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 SUV39H1O43463 412 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 ZNF354AO60765 605 aaPredicted RBP7.39□□□□□ -1.23
CPNE3-209ENST00000620393 UGT2B17O75795 530 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 OR2J2O76002 312 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 PRKD3O94806 890 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 CAPNS1P04632 268 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 ALPPP05187 535 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 GPIP06744 558 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 DBIP07108 87 aaKnown RBP7.39□□□□□ -1.23
CPNE3-209ENST00000620393 PABPC4LP0CB38 370 aaKnown RBP7.39□□□□□ -1.23
CPNE3-209ENST00000620393 HOXB6P17509 224 aaKnown RBP7.39□□□□□ -1.23
CPNE3-209ENST00000620393 TBXA2RP21731 343 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 ABCD3P28288 659 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 SLC7A1P30825 629 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 KRT20P35900 424 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 RFX3P48380 749 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 KCNJ5P48544 419 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 ERFP50548 548 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 ATP12AP54707 1039 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 RRADP55042 308 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 HPCAP84074 193 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 PLCXD2Q0VAA5 305 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 ZNF141Q15928 474 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 MAPK14Q16539 360 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 DUSP7Q16829 419 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 FLYWCH1Q4VC44 716 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 LRRC23Q53EV4 343 aaPredicted RBP7.39□□□□□ -1.23
CPNE3-209ENST00000620393 ZNF311Q5JNZ3 666 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 ATP1A1-AS1Q5TC04 95 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 AAGABQ6PD74 315 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 LYPD8Q6UX82 237 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 NUP54Q7Z3B4 507 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 GALNT10Q86SR1 603 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 ARMC8Q8IUR7 673 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 PRR22Q8IZ63 422 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 ADGRG5Q8IZF4 528 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 SLC5A8Q8N695 610 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 SMYD1Q8NB12 490 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 PAPD5Q8NDF8 572 aaKnown RBP7.39□□□□□ -1.23
CPNE3-209ENST00000620393 OR4C3Q8NH37 302 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 SLC22A8Q8TCC7 542 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 RASSF5Q8WWW0 418 aa7.39□□□□□ -1.23
CPNE3-209ENST00000620393 OIT3Q8WWZ8 545 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms