RNA–Protein interactions for RNA: ENST00000619541.4

SYNRG-225, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-225ENST00000619541 LIPT1Q9Y234 373 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 CHST2Q9Y4C5 530 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 EFCAB14O75071 495 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 RP2O75695 350 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 F11P03951 625 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 WNT1P04628 370 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 C8GP07360 202 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 NFYAP23511 347 aaPredicted RBP13.68□□□□□ -0.22
SYNRG-225ENST00000619541 SLC25A35Q3KQZ1 300 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 PYHIN1Q6K0P9 492 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 SMARCD3Q6STE5 483 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 TFAP2EQ6VUC0 442 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 LINC00469Q8N7U9 141 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 DDX31Q9H8H2 851 aaKnown RBP13.68□□□□□ -0.22
SYNRG-225ENST00000619541 ACTR10Q9NZ32 417 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 COL4A4P53420 1690 aaPredicted RBP13.68□□□□□ -0.22
SYNRG-225ENST00000619541 OR6C74A6NCV1 312 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 FRS3O43559 492 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 NR2F1P10589 423 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 PAICSP22234 425 aaKnown RBP13.68□□□□□ -0.22
SYNRG-225ENST00000619541 PRPH2P23942 346 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 MPEG1Q2M385 716 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 AGTRAPQ6RW13 159 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.68□□□□□ -0.22
SYNRG-225ENST00000619541 RNF165Q6ZSG1 346 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 PDZD9Q8IXQ8 264 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 CRIPAKQ8N1N5 446 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 BBS1Q8NFJ9 593 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 ASB11Q8WXH4 323 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 ARMC5Q96C12 935 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 FCRL1Q96LA6 429 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 HHIPQ96QV1 700 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 DPH7Q9BTV6 452 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 AUNIPQ9H7T9 357 aa13.68□□□□□ -0.22
SYNRG-225ENST00000619541 SOX30O94993 753 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 LDOC1O95751 146 aaPredicted RBP13.67□□□□□ -0.22
SYNRG-225ENST00000619541 RAB3BP20337 219 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 ATP5A1P25705 553 aaKnown RBP13.67□□□□□ -0.22
SYNRG-225ENST00000619541 CORO1AP31146 461 aaKnown RBP13.67□□□□□ -0.22
SYNRG-225ENST00000619541 SYTL3Q4VX76 610 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 NHLRC3Q5JS37 347 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 FAAP20Q6NZ36 180 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 CDC73Q6P1J9 531 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 OAFQ86UD1 273 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 PAQR7Q86WK9 346 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 SLITRK4Q8IW52 837 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 OR10H4Q8NGA5 316 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 ACOT12Q8WYK0 555 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 CNOT9Q92600 299 aaKnown RBP13.67□□□□□ -0.22
SYNRG-225ENST00000619541 ATOH1Q92858 354 aaPredicted RBP13.67□□□□□ -0.22
SYNRG-225ENST00000619541 HGDQ93099 445 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 CHFRQ96EP1 664 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 C20orf85Q9H1P6 137 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 EDARQ9UNE0 448 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 ZC3H12DA2A288 527 aaKnown RBP13.67□□□□□ -0.22
SYNRG-225ENST00000619541 GPR37L1O60883 481 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 RECKO95980 971 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 IL3P08700 152 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 ATP5C1P36542 298 aaKnown RBP13.67□□□□□ -0.22
SYNRG-225ENST00000619541 SLC6A12P48065 614 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 CNTN1Q12860 1018 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 LIPJQ5W064 366 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 HBMQ6B0K9 141 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 C11orf96Q7Z7L8 435 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 ZFPM2Q8WW38 1151 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 ORAI3Q9BRQ5 295 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 PELOQ9BRX2 385 aaKnown RBP13.67□□□□□ -0.22
SYNRG-225ENST00000619541 BHLHE41Q9C0J9 482 aaPredicted RBP13.67□□□□□ -0.22
SYNRG-225ENST00000619541 TMEM168Q9H0V1 697 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 OR51I1Q9H343 314 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 WDR26Q9H7D7 661 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 RCE1Q9Y256 329 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 TRABD2BA6NFA1 517 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 OR6C75A6NL08 312 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 CASC3O15234 703 aaKnown RBP13.67□□□□□ -0.22
SYNRG-225ENST00000619541 RGS9O75916 674 aaPredicted RBP13.67□□□□□ -0.22
SYNRG-225ENST00000619541 GNRH1P01148 92 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 PTBP1P26599 531 aaKnown RBP eCLIP13.67□□□□□ -0.22
SYNRG-225ENST00000619541 PREPP48147 710 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 SCN5AQ14524 2016 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 RGS7BPQ6MZT1 257 aaPredicted RBP13.67□□□□□ -0.22
SYNRG-225ENST00000619541 SFXN4Q6P4A7 337 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 C11orf88Q6PI97 169 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 NPAS4Q8IUM7 802 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 FANK1Q8TC84 345 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 TMEM38AQ9H6F2 299 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 CXorf36Q9H7Y0 433 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 PRDM9Q9NQV7 894 aa13.67□□□□□ -0.22
SYNRG-225ENST00000619541 MRTO4Q9UKD2 239 aaKnown RBP13.67□□□□□ -0.22
SYNRG-225ENST00000619541 SMAD6O43541 496 aaKnown RBP13.66□□□□□ -0.22
SYNRG-225ENST00000619541 PTP4A3O75365 173 aa13.66□□□□□ -0.22
SYNRG-225ENST00000619541 KHDRBS3O75525 346 aaKnown RBP13.66□□□□□ -0.22
SYNRG-225ENST00000619541 RBMS1P29558 406 aaKnown RBP13.66□□□□□ -0.22
SYNRG-225ENST00000619541 RECQLP46063 649 aaPredicted RBP13.66□□□□□ -0.22
SYNRG-225ENST00000619541 SMIM11AP58511 58 aa13.66□□□□□ -0.22
SYNRG-225ENST00000619541 TLE2Q04725 743 aa13.66□□□□□ -0.22
SYNRG-225ENST00000619541 NHLRC1Q6VVB1 395 aa13.66□□□□□ -0.22
SYNRG-225ENST00000619541 SERPINA12Q8IW75 414 aa13.66□□□□□ -0.22
SYNRG-225ENST00000619541 OR56B4Q8NH76 319 aa13.66□□□□□ -0.22
SYNRG-225ENST00000619541 WDR20Q8TBZ3 569 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms