RNA–Protein interactions for RNA: ENST00000618363.4

SHANK2-221, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-221ENST00000618363 LINC01387J3KSC0 135 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 SCAMP2O15127 329 aaKnown RBP10.63□□□□□ -0.71
SHANK2-221ENST00000618363 TM9SF1O15321 606 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 BIRC5O15392 142 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 CFLARO15519 480 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 TYROBPO43914 113 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 PEPDP12955 493 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 HK1P19367 917 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 CHMP24386 653 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 CEACAM8P31997 349 aaPredicted RBP10.63□□□□□ -0.71
SHANK2-221ENST00000618363 KIR2DL3P43628 341 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 SERPINB4P48594 390 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 ASCL1P50553 236 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 EEF1A1P68104 462 aaKnown RBP10.63□□□□□ -0.71
SHANK2-221ENST00000618363 TFF3Q07654 80 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 ZNF844Q08AG5 666 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 CHI3L2Q15782 390 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 UGT3A2Q3SY77 523 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 SPDYE7PQ495Y7 208 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 EEF1A1P5Q5VTE0 462 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 IL23RQ5VWK5 629 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 RAET1LQ5VY80 246 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 ZCCHC12Q6PEW1 402 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 ARSKQ6UWY0 536 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 KIF18BQ86Y91 864 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 GRAMD2AQ8IUY3 354 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 LIX1LQ8IVB5 337 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 MEIOBQ8N635 442 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 OR6Y1Q8NGX8 325 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 GOT1L1Q8NHS2 421 aaPredicted RBP10.63□□□□□ -0.71
SHANK2-221ENST00000618363 DUSP19Q8WTR2 217 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 NTNG2Q96CW9 530 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 ZFP3Q96NJ6 502 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 PAIP2Q9BPZ3 127 aaKnown RBP10.63□□□□□ -0.71
SHANK2-221ENST00000618363 G6PC3Q9BUM1 346 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 C1orf50Q9BV19 199 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 SSU72Q9NP77 194 aaKnown RBP10.63□□□□□ -0.71
SHANK2-221ENST00000618363 MED11Q9P086 117 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 ZDHHC2Q9UIJ5 367 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 ITGB1BP2Q9UKP3 347 aa10.63□□□□□ -0.71
SHANK2-221ENST00000618363 FAF1Q9UNN5 650 aaPredicted RBP10.63□□□□□ -0.71
SHANK2-221ENST00000618363 HCFC1P51610 2035 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 UQCRHLA0A096LP55 91 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 MBD3L4A6NDZ8 208 aaPredicted RBP10.62□□□□□ -0.71
SHANK2-221ENST00000618363 MBD3L3A6NE82 208 aaPredicted RBP10.62□□□□□ -0.71
SHANK2-221ENST00000618363 MBD3L5A6NJ08 208 aaPredicted RBP10.62□□□□□ -0.71
SHANK2-221ENST00000618363 EEF1E1-BLOC1S5C9J1V9 151 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 SYT5O00445 386 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 EEF1E1O43324 174 aaKnown RBP10.62□□□□□ -0.71
SHANK2-221ENST00000618363 NDUFB5O43674 189 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 ERLIN1O75477 346 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 SOX30O94993 753 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 UTS2O95399 124 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 PSMG1O95456 288 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 SERPINE1P05121 402 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 KRT16P08779 473 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 TMIGD3P0DMS9 266 aaPredicted RBP10.62□□□□□ -0.71
SHANK2-221ENST00000618363 CREB1P16220 341 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 IGFBP2P18065 325 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 POU3F2P20265 443 aaPredicted RBP10.62□□□□□ -0.71
SHANK2-221ENST00000618363 PRPS1L1P21108 318 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 ATP6V1C1P21283 382 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 STARP49675 285 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 WNT3P56703 355 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 ABCE1P61221 599 aaKnown RBP10.62□□□□□ -0.71
SHANK2-221ENST00000618363 TP53BP2Q13625 1128 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 PDE7AQ13946 482 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 MLC1Q15049 377 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 ZNF385BQ569K4 471 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 C6orf136Q5SQH8 315 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 DCST1Q5T197 706 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 BHLHB9Q6PI77 547 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 SEM1Q6ZVN7 128 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 MARCH3Q86UD3 253 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 COX18Q8N8Q8 333 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 MBD3L2Q8NHZ7 208 aaPredicted RBP10.62□□□□□ -0.71
SHANK2-221ENST00000618363 PIK3R3Q92569 461 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 RNASE6Q93091 150 aaKnown RBP10.62□□□□□ -0.71
SHANK2-221ENST00000618363 WNT2BQ93097 391 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 PKNOX2Q96KN3 472 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 TREX2Q9BQ50 279 aaPredicted RBP10.62□□□□□ -0.71
SHANK2-221ENST00000618363 TUBA1CQ9BQE3 449 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 PIGQQ9BRB3 760 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 ZCCHC3Q9NUD5 404 aaKnown RBP10.62□□□□□ -0.71
SHANK2-221ENST00000618363 ATP6V1HQ9UI12 483 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 RAB21Q9UL25 225 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 PCDHGB4Q9UN71 923 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 EDARQ9UNE0 448 aa10.62□□□□□ -0.71
SHANK2-221ENST00000618363 GXYLT2A0PJZ3 443 aa10.61□□□□□ -0.71
SHANK2-221ENST00000618363 CLCA1A8K7I4 914 aa10.61□□□□□ -0.71
SHANK2-221ENST00000618363 SCDO00767 359 aa10.61□□□□□ -0.71
SHANK2-221ENST00000618363 FADS1O60427 444 aa10.61□□□□□ -0.71
SHANK2-221ENST00000618363 NKX2-2O95096 273 aa10.61□□□□□ -0.71
SHANK2-221ENST00000618363 ANGPTL1O95841 491 aa10.61□□□□□ -0.71
SHANK2-221ENST00000618363 IL18BPO95998 194 aa10.61□□□□□ -0.71
SHANK2-221ENST00000618363 EFNA1P20827 205 aaPredicted RBP10.61□□□□□ -0.71
SHANK2-221ENST00000618363 LCN1P31025 176 aa10.61□□□□□ -0.71
SHANK2-221ENST00000618363 FRKP42685 505 aaPredicted RBP10.61□□□□□ -0.71
SHANK2-221ENST00000618363 ETV4P43268 484 aa10.61□□□□□ -0.71
SHANK2-221ENST00000618363 CPA2P48052 419 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms