RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 CDYLQ9Y232 598 aa11.34□□□□□ -0.59
SRRT-216ENST00000618262 HSPB11Q9Y547 144 aa11.34□□□□□ -0.59
SRRT-216ENST00000618262 PPP6CO00743 305 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 KHNYNO15037 678 aaKnown RBP11.33□□□□□ -0.6
SRRT-216ENST00000618262 UGT2B11O75310 529 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 IL1AP01583 271 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 FTH1P02794 183 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 ADORA3P0DMS8 318 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 NR2F1P10589 423 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 LCN1P31025 176 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 SPEM2Q0P670 501 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 AQP6Q13520 282 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 VEZF1Q14119 521 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 KCNMB1Q16558 191 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 SLC5A12Q1EHB4 618 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 LBHQ53QV2 105 aaPredicted RBP11.33□□□□□ -0.6
SRRT-216ENST00000618262 CDC73Q6P1J9 531 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 SH2D5Q6ZV89 423 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 EFCAB3Q8N7B9 438 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 SYT14Q8NB59 555 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 C22orf15Q8WYQ4 148 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 MED8Q96G25 268 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 TMEM41AQ96HV5 264 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 REXO4Q9GZR2 422 aaKnown RBP11.33□□□□□ -0.6
SRRT-216ENST00000618262 SEPSECSQ9HD40 501 aaKnown RBP11.33□□□□□ -0.6
SRRT-216ENST00000618262 CLEC5AQ9NY25 188 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 SPHK1Q9NYA1 384 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 KCNK4Q9NYG8 393 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 SLC17A4Q9Y2C5 497 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 PCDHB1Q9Y5F3 818 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 A0A1W2PR77 199 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 PRR33A8MZF0 331 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 ITGB1BP1O14713 200 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 CD1DP15813 335 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 JUNBP17275 347 aaPredicted RBP11.33□□□□□ -0.6
SRRT-216ENST00000618262 MPSTP25325 297 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 VEGFCP49767 419 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 UGT2B15P54855 530 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 MAZP56270 477 aaKnown RBP11.33□□□□□ -0.6
SRRT-216ENST00000618262 STX4Q12846 297 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 TCF15Q12870 199 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 FAM69AQ5T7M9 428 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 ARHGAP40Q5TG30 622 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 LYPLAL1Q5VWZ2 237 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 ELP2Q6IA86 826 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 UBE2R2Q712K3 238 aaPredicted RBP11.33□□□□□ -0.6
SRRT-216ENST00000618262 ISCA2Q86U28 154 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 RAB43Q86YS6 212 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 C10orf107Q8IVU9 208 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 PRSS33Q8NF86 280 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 PDCD10Q9BUL8 212 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 GAREM1Q9H706 876 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 COQ10BQ9H8M1 238 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 TREM2Q9NZC2 230 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 ELF5Q9UKW6 265 aaPredicted RBP11.33□□□□□ -0.6
SRRT-216ENST00000618262 CEP192Q8TEP8 1941 aa11.33□□□□□ -0.6
SRRT-216ENST00000618262 SBK2P0C263 348 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 SLC35G4P0C7Q5 338 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 ACAA2P42765 397 aaKnown RBP11.32□□□□□ -0.6
SRRT-216ENST00000618262 ASAH1Q13510 395 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 NAE1Q13564 534 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 FAM83EQ2M2I3 478 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 HLA-BQ31612 363 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 LRRC8EQ6NSJ5 796 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 TMEM108Q6UXF1 575 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 TCTE3Q8IZS6 198 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 OR2L3Q8NG85 312 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 ELP5Q8TE02 316 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 PHF10Q8WUB8 498 aaKnown RBP11.32□□□□□ -0.6
SRRT-216ENST00000618262 LINC00052Q96N35 136 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 MAPKAP1Q9BPZ7 522 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 C2orf88Q9BSF0 95 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 C1QTNF1Q9BXJ1 281 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 MARCOQ9UEW3 520 aaPredicted RBP11.32□□□□□ -0.6
SRRT-216ENST00000618262 ZNF639Q9UID6 485 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 PILRBQ9UKJ0 227 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 A0A1W2PPH5 198 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 MGAT4DA6NG13 374 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 M0R3G1 203 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 GALR2O43603 387 aaPredicted RBP11.32□□□□□ -0.6
SRRT-216ENST00000618262 TYROBPO43914 113 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 GDF9O60383 454 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 SH3BGRLO75368 114 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 TNFP01375 233 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 KITP10721 976 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 MAP3K8P41279 467 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 DDI2Q5TDH0 399 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 ZNF782Q6ZMW2 699 aaPredicted RBP11.32□□□□□ -0.6
SRRT-216ENST00000618262 C17orf107Q6ZR85 190 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 LHFPL2Q6ZUX7 228 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 KLBQ86Z14 1044 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 TFGQ92734 400 aaPredicted RBP11.32□□□□□ -0.6
SRRT-216ENST00000618262 KIAA1191Q96A73 305 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 TSPAN17Q96FV3 270 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 NSUN5Q96P11 429 aaKnown RBP11.32□□□□□ -0.6
SRRT-216ENST00000618262 INSM2Q96T92 566 aaPredicted RBP11.32□□□□□ -0.6
SRRT-216ENST00000618262 SORBS1Q9BX66 1292 aaKnown RBP11.32□□□□□ -0.6
SRRT-216ENST00000618262 SEMA4CQ9C0C4 833 aa11.32□□□□□ -0.6
SRRT-216ENST00000618262 MS4A7Q9GZW8 240 aaPredicted RBP11.32□□□□□ -0.6
SRRT-216ENST00000618262 KLHL31Q9H511 634 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms