RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 POLE3Q9NRF9 147 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 TAS2R10Q9NYW0 307 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 VDAC3Q9Y277 283 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 A0A1W2PPC1 479 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 TSPAN11A1L157 253 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 PHYHO14832 338 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 VNN2O95498 520 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 RLN1P04808 185 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 HCKP08631 526 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 CTXN1P60606 82 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 TCTN1Q2MV58 587 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 RNASE12Q5GAN4 147 aaKnown RBP8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 PRAMEF8Q5VWM4 474 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 PRAMEF7Q5VXH5 474 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 LSMEM2Q8N112 164 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 JAGN1Q8N5M9 183 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 ESX1Q8N693 406 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 ZSCAN4Q8NAM6 433 aaPredicted RBP8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 ZNF548Q8NEK5 533 aaPredicted RBP8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 C15orf40Q8WUR7 153 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 FAM46AQ96IP4 442 aaKnown RBP8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 OR5B2Q96R09 309 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 CTRCQ99895 268 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 UTP23Q9BRU9 249 aaKnown RBP8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 TTYH2Q9BSA4 534 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 TWSG1Q9GZX9 223 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 LRRN3Q9H3W5 708 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 TUBA8Q9NY65 449 aaPredicted RBP8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 ING4Q9UNL4 249 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 COLQQ9Y215 455 aaPredicted RBP8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 SLC17A4Q9Y2C5 497 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 OR51B4Q9Y5P0 310 aa8.87□□□□□ -0.99
CLTCL1-208ENST00000615606 CDC14CA4D256 554 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 FTCDNL1E5RQL4 147 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 GSTT2BP0CG30 244 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 SFTPDP35247 375 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 DCTP40126 519 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 SSR4P51571 173 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 HBA1P69905 142 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 TSTQ16762 297 aaKnown RBP8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 FAM217AQ8IXS0 508 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 SETD6Q8TBK2 473 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 GTF2H4Q92759 462 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 CCNL2Q96S94 520 aaPredicted RBP8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 FEVQ99581 238 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 PRRX2Q99811 253 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 OR52A5Q9H2C5 316 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 GPN1Q9HCN4 374 aaPredicted RBP8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 SEC14L4Q9UDX3 406 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 SLC7A7Q9UM01 511 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 RPH3AQ9Y2J0 694 aaPredicted RBP8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 FAM240BA0A1B0GVZ2 78 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 GADD45AP24522 165 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 CAPZBP47756 277 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 TSPAN5P62079 268 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 ULK3Q6PHR2 472 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 KMT5CQ86Y97 462 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 MISPQ8IVT2 679 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 SMRP1Q8NCR6 262 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 C1orf216Q8TAB5 229 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 PRRC1Q96M27 445 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 SLC46A1Q96NT5 459 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 ZNF300Q96RE9 604 aaPredicted RBP8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 NPIPA5A0A0B4J1W7 369 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 A6NIZ1 184 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 NPIPA7E9PJI5 369 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 LMO7DNF2Z398 122 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 SULT2B1O00204 365 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 RBMXL2O75526 392 aaKnown RBP8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 ITGA5P08648 1049 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 MRPL3P09001 348 aaKnown RBP8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 FURINP09958 794 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 NPIPA8P0DM63 369 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 PEPDP12955 493 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 POU3F2P20265 443 aaPredicted RBP8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 MCCD1P59942 119 aaPredicted RBP8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 RAP1BP61224 184 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 RAP1AP62834 184 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 ARFRP1Q13795 201 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 PLET1Q6UQ28 207 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 C6orf15Q6UXA7 325 aaPredicted RBP8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 IL20RBQ6UXL0 311 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 TMPRSS9Q7Z410 1059 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 TMEM150AQ86TG1 271 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 OR7G1Q8NGA0 311 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 HTRA1Q92743 480 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 MRGPRX3Q96LB0 322 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 DCBLD2Q96PD2 775 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 TMED9Q9BVK6 235 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 B3GNT4Q9C0J1 378 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 RXFP3Q9NSD7 469 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 DCAF13Q9NV06 445 aaKnown RBP8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 TEX10Q9NXF1 929 aaPredicted RBP8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 RNF215Q9Y6U7 377 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 KIAA1217Q5T5P2 1943 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 HTR3EA5X5Y0 456 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 METTL21EPA6NDL7 271 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 H0YJX3 145 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 H3BML4 177 aa8.86□□□□□ -0.99
CLTCL1-208ENST00000615606 I6L893 689 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms