RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 GHRLQ9UBU3 117 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 TMX2-CTNND1H3BSU7 103 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 KIAA0355O15063 1070 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 LDB2O43679 373 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 SRPX2O60687 465 aaPredicted RBP4.32□□□□□ -1.72
CHD9-221ENST00000615216 ZNF888P0CJ79 500 aaPredicted RBP4.32□□□□□ -1.72
CHD9-221ENST00000615216 CHATP28329 748 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 NTSR1P30989 418 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 LSSP48449 732 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 POLR2HP52434 150 aaKnown RBP4.32□□□□□ -1.72
CHD9-221ENST00000615216 GLO1Q04760 184 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 CEACAM7Q14002 265 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 SLC35G1Q2M3R5 365 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 C1orf220Q5T0J3 134 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 ZNF691Q5VV52 312 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 KIAA0907Q7Z7F0 614 aaPredicted RBP4.32□□□□□ -1.72
CHD9-221ENST00000615216 ACVR1CQ8NER5 493 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 TBC1D20Q96BZ9 403 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 CNTNAP3BQ96NU0 1288 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 NTMT1Q9BV86 223 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 SLC17A9Q9BYT1 436 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 ZBTB20Q9HC78 741 aaPredicted RBP4.32□□□□□ -1.72
CHD9-221ENST00000615216 PAQR5Q9NXK6 330 aaPredicted RBP4.32□□□□□ -1.72
CHD9-221ENST00000615216 A0A1W2PQL4 384 aaPredicted RBP4.32□□□□□ -1.72
CHD9-221ENST00000615216 ZNF860A6NHJ4 632 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 H3BSH0 61 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 NME4O00746 187 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 SSX5O60225 188 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 AKR1C4P17516 323 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 UBE2NP61088 152 aaKnown RBP4.32□□□□□ -1.72
CHD9-221ENST00000615216 ERVK-16P61578 105 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 SHC2P98077 582 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 CNN3Q15417 329 aaKnown RBP4.32□□□□□ -1.72
CHD9-221ENST00000615216 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.32□□□□□ -1.72
CHD9-221ENST00000615216 ANKRD54Q6NXT1 300 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 CNIH2Q6PI25 160 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 CTU1Q7Z7A3 348 aaKnown RBP4.32□□□□□ -1.72
CHD9-221ENST00000615216 OR52B6Q8NGF0 335 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 NDNFQ8TB73 568 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 CD200R1Q8TD46 325 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 TMEM246Q9BRR3 403 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 IL21RQ9HBE5 538 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 APMAPQ9HDC9 416 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 FZD3Q9NPG1 666 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 GDE1Q9NZC3 331 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 HSFX1Q9UBD0 423 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 SMIM30A4D0T7 59 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 HEPACAM2A8MVW5 462 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 SULT1C2O00338 296 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 TFP02787 698 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 RPS17P08708 135 aaKnown RBP4.32□□□□□ -1.72
CHD9-221ENST00000615216 UBBP0CG47 229 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 UBCP0CG48 685 aaKnown RBP4.32□□□□□ -1.72
CHD9-221ENST00000615216 RPS15P62841 145 aaKnown RBP4.32□□□□□ -1.72
CHD9-221ENST00000615216 RPS27AP62979 156 aaKnown RBP4.32□□□□□ -1.72
CHD9-221ENST00000615216 UBA52P62987 128 aaKnown RBP4.32□□□□□ -1.72
CHD9-221ENST00000615216 PCGF3Q3KNV8 242 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 ACTBL2Q562R1 376 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 ZNF852Q6ZMS4 543 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 LARP4Q71RC2 724 aaKnown RBP eCLIP4.32□□□□□ -1.72
CHD9-221ENST00000615216 NAXEQ8NCW5 288 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 BEST4Q8NFU0 473 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 ASB12Q8WXK4 309 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 MUL1Q969V5 352 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 MALSU1Q96EH3 234 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 ZNF587Q96SQ5 575 aaPredicted RBP4.32□□□□□ -1.72
CHD9-221ENST00000615216 INPP5KQ9BT40 448 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 CACNG6Q9BXT2 260 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 BEX2Q9BXY8 128 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 GSTO2Q9H4Y5 243 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 NMNAT1Q9HAN9 279 aaPredicted RBP4.32□□□□□ -1.72
CHD9-221ENST00000615216 BEX1Q9HBH7 125 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 SRA1Q9HD15 236 aaKnown RBP4.32□□□□□ -1.72
CHD9-221ENST00000615216 RGPD4Q7Z3J3 1758 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 NINQ8N4C6 2090 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 H3BMQ9 156 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 LYRM1O43325 122 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 TGM5O43548 720 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 CDK1P06493 297 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 PRSS3P35030 304 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 GGT5P36269 586 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 TAP2Q03519 686 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 CDK5R2Q13319 367 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 RAB33AQ14088 237 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 NSDHLQ15738 373 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 LRRC37A5PQ49AS3 106 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 OR51T1Q8NGJ9 327 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 NETO1Q8TDF5 533 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 COG8Q96MW5 612 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 BTBD2Q9BX70 525 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 TP63Q9H3D4 680 aaPredicted RBP4.32□□□□□ -1.72
CHD9-221ENST00000615216 RLIMQ9NVW2 624 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 SLC7A7Q9UM01 511 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 TRIM64BA6NI03 449 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 PPP1R3DO95685 299 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 TFPTP0C1Z6 253 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 LAMP1P11279 417 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 SGSHP51688 502 aa4.32□□□□□ -1.72
CHD9-221ENST00000615216 RRAS2P62070 204 aaPredicted RBP4.32□□□□□ -1.72
CHD9-221ENST00000615216 GRIN2CQ14957 1233 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms