RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 BOLA2-SMG1P6H3BVE0 249 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 FOXS1O43638 330 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 ATP1B1P05026 303 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 NT5EP21589 574 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 GABRA4P48169 554 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 PPM1FP49593 454 aaPredicted RBP17.82■□□□□ 0.44
MMP28-204ENST00000615136 MAT1AQ00266 395 aaKnown RBP17.82■□□□□ 0.44
MMP28-204ENST00000615136 HOXC5Q00444 222 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 TARDBPQ13148 414 aaKnown RBP eCLIP17.82■□□□□ 0.44
MMP28-204ENST00000615136 NDUFA9Q16795 377 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 PRICKLE4Q2TBC4 344 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 TIMM50Q3ZCQ8 353 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 PODNL1Q6PEZ8 512 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 ATCAYQ86WG3 371 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 SNX29P2Q8IUI4 249 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 SAMD14Q8IZD0 417 aaPredicted RBP17.82■□□□□ 0.44
MMP28-204ENST00000615136 CLIP4Q8N3C7 705 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 CAMKK1Q8N5S9 505 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 OR8J1Q8NGP2 316 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 WDR36Q8NI36 951 aaKnown RBP17.82■□□□□ 0.44
MMP28-204ENST00000615136 PRRC1Q96M27 445 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 CENPOQ9BU64 300 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 CDADC1Q9BWV3 514 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 PINK1Q9BXM7 581 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 ARMC7Q9H6L4 198 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 FBXO34Q9NWN3 711 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 MAT2BQ9NZL9 334 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 C19orf53Q9UNZ5 99 aaPredicted RBP17.82■□□□□ 0.44
MMP28-204ENST00000615136 LOC100506127A0A0U1RQW1 187 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 LILRA5A6NI73 299 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 H3BN98 237 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 TGFBR3LH3BV60 316 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 TAF4O00268 1085 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 ALPPP05187 535 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 ALOX5P09917 674 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 HSMCR30P0CW71 290 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 MYF5P13349 255 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 RAB38P57729 211 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 RHAGQ02094 409 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 COX10Q12887 443 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 DOC2BQ14184 412 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 MED22Q15528 200 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 SOWAHCQ53LP3 525 aaPredicted RBP17.82■□□□□ 0.44
MMP28-204ENST00000615136 TSSK4Q6SA08 328 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 CASP12Q6UXS9 341 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 PRDM9Q9NQV7 894 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 PTGFRNQ9P2B2 879 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 KLHL3Q9UH77 587 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 LIPT1Q9Y234 373 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 NTNG1Q9Y2I2 539 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 LSM2Q9Y333 95 aaKnown RBP17.82■□□□□ 0.44
MMP28-204ENST00000615136 SPACA6W5XKT8 324 aa17.82■□□□□ 0.44
MMP28-204ENST00000615136 AGAP5A6NIR3 686 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 CCRL2O00421 344 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 CDC123O75794 336 aaPredicted RBP17.81■□□□□ 0.44
MMP28-204ENST00000615136 ATXN8OSP0DMR3 200 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 DBTP11182 482 aaKnown RBP17.81■□□□□ 0.44
MMP28-204ENST00000615136 HNRNPKP61978 463 aaKnown RBP eCLIP17.81■□□□□ 0.44
MMP28-204ENST00000615136 ERV3-1Q14264 604 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 OCLNQ16625 522 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 TSTQ16762 297 aaKnown RBP17.81■□□□□ 0.44
MMP28-204ENST00000615136 ATAD3BQ5T9A4 648 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 MFSD4BQ5TF39 518 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 TYW3Q6IPR3 259 aaKnown RBP17.81■□□□□ 0.44
MMP28-204ENST00000615136 PLEKHG7Q6ZR37 379 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 MEX3DQ86XN8 651 aaKnown RBP17.81■□□□□ 0.44
MMP28-204ENST00000615136 METTL27Q8N6F8 245 aaPredicted RBP17.81■□□□□ 0.44
MMP28-204ENST00000615136 PIK3R3Q92569 461 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 NEURL2Q9BR09 285 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 CHCHD6Q9BRQ6 235 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 FNDC11Q9BVV2 318 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 RNF167Q9H6Y7 350 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 DNAJC27Q9NZQ0 273 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 ARHGAP33O14559 1287 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 PIAS2O75928 621 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 MMP11P24347 488 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 CXCL12P48061 93 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 RNF144AP50876 292 aaPredicted RBP17.81■□□□□ 0.44
MMP28-204ENST00000615136 DUSP8Q13202 625 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 SSX1Q16384 188 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 EXOSC6Q5RKV6 272 aaKnown RBP17.81■□□□□ 0.44
MMP28-204ENST00000615136 RNLSQ5VYX0 342 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 OGFOD3Q6PK18 319 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 MORN4Q8NDC4 146 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 OR4K5Q8NGD3 323 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 OPALINQ96PE5 141 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 RACGAP1Q9H0H5 632 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 UCK1Q9HA47 277 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 RNF215Q9Y6U7 377 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 CACNA1IQ9P0X4 2223 aa17.81■□□□□ 0.44
MMP28-204ENST00000615136 ASXL3Q9C0F0 2248 aa17.8■□□□□ 0.44
MMP28-204ENST00000615136 CSTF2P33240 577 aaKnown RBP eCLIP17.8■□□□□ 0.44
MMP28-204ENST00000615136 TRHRP34981 398 aaPredicted RBP17.8■□□□□ 0.44
MMP28-204ENST00000615136 ZNF91Q05481 1191 aa17.8■□□□□ 0.44
MMP28-204ENST00000615136 NCF4Q15080 339 aa17.8■□□□□ 0.44
MMP28-204ENST00000615136 PUS10Q3MIT2 529 aaKnown RBP17.8■□□□□ 0.44
MMP28-204ENST00000615136 C14orf28Q4W4Y0 310 aa17.8■□□□□ 0.44
MMP28-204ENST00000615136 C1orf94Q6P1W5 598 aa17.8■□□□□ 0.44
MMP28-204ENST00000615136 ZER1Q7Z7L7 766 aa17.8■□□□□ 0.44
MMP28-204ENST00000615136 OR52P1PQ8NH57 321 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms