RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 COX4I2Q96KJ9 171 aa16.09■□□□□ 0.17
SMN2-213ENST00000614240 TMEM237Q96Q45 408 aa16.09■□□□□ 0.17
SMN2-213ENST00000614240 PRRG4Q9BZD6 226 aa16.09■□□□□ 0.17
SMN2-213ENST00000614240 KLHL4Q9C0H6 718 aa16.09■□□□□ 0.17
SMN2-213ENST00000614240 Q9N2J8 555 aa16.09■□□□□ 0.17
SMN2-213ENST00000614240 DDX18Q9NVP1 670 aaKnown RBP16.09■□□□□ 0.17
SMN2-213ENST00000614240 TMEM216Q9P0N5 145 aa16.09■□□□□ 0.17
SMN2-213ENST00000614240 ZNF175Q9Y473 711 aa16.09■□□□□ 0.17
SMN2-213ENST00000614240 EXOC1LA0A1B0GW35 172 aa16.08■□□□□ 0.16
SMN2-213ENST00000614240 OR2M5A3KFT3 312 aa16.08■□□□□ 0.16
SMN2-213ENST00000614240 GMFGO60234 142 aa16.08■□□□□ 0.16
SMN2-213ENST00000614240 FADS1O60427 444 aa16.08■□□□□ 0.16
SMN2-213ENST00000614240 URI1O94763 535 aaPredicted RBP16.08■□□□□ 0.16
SMN2-213ENST00000614240 CTAGE8P0CG41 777 aa16.08■□□□□ 0.16
SMN2-213ENST00000614240 FCGR2AP12318 317 aa16.08■□□□□ 0.16
SMN2-213ENST00000614240 TBXA2RP21731 343 aa16.08■□□□□ 0.16
SMN2-213ENST00000614240 PCSK6P29122 969 aa16.08■□□□□ 0.16
SMN2-213ENST00000614240 NTSP30990 170 aa16.08■□□□□ 0.16
SMN2-213ENST00000614240 PSMD4P55036 377 aaKnown RBP16.08■□□□□ 0.16
SMN2-213ENST00000614240 PKNOX1P55347 436 aa16.08■□□□□ 0.16
SMN2-213ENST00000614240 CLDN15P56746 228 aa16.08■□□□□ 0.16
SMN2-213ENST00000614240 LCP2Q13094 533 aa16.08■□□□□ 0.16
SMN2-213ENST00000614240 EXOC3L2Q2M3D2 409 aa16.08■□□□□ 0.16
SMN2-213ENST00000614240 ANKRD34AQ69YU3 496 aa16.08■□□□□ 0.16
SMN2-213ENST00000614240 GALNT18Q6P9A2 607 aa16.08■□□□□ 0.16
SMN2-213ENST00000614240 PRSS57Q6UWY2 283 aa16.08■□□□□ 0.16
SMN2-213ENST00000614240 MARCH3Q86UD3 253 aa16.08■□□□□ 0.16
SMN2-213ENST00000614240 SLC22A9Q8IVM8 553 aa16.08■□□□□ 0.16
SMN2-213ENST00000614240 CTAGE4Q8IX94 777 aa16.08■□□□□ 0.16
SMN2-213ENST00000614240 CIARTQ8N365 385 aaPredicted RBP16.08■□□□□ 0.16
SMN2-213ENST00000614240 C1GALT1C1Q96EU7 318 aa16.08■□□□□ 0.16
SMN2-213ENST00000614240 TBL1XR1Q9BZK7 514 aa16.08■□□□□ 0.16
SMN2-213ENST00000614240 RNF122Q9H9V4 155 aa16.08■□□□□ 0.16
SMN2-213ENST00000614240 FAM120CQ9NX05 1096 aaKnown RBP16.08■□□□□ 0.16
SMN2-213ENST00000614240 FLRT3Q9NZU0 649 aa16.08■□□□□ 0.16
SMN2-213ENST00000614240 STOML1Q9UBI4 398 aa16.08■□□□□ 0.16
SMN2-213ENST00000614240 C19orf53Q9UNZ5 99 aaPredicted RBP16.08■□□□□ 0.16
SMN2-213ENST00000614240 A0A087WV62 115 aa16.07■□□□□ 0.16
SMN2-213ENST00000614240 MYO1GB0I1T2 1018 aa16.07■□□□□ 0.16
SMN2-213ENST00000614240 SLITRK5O94991 958 aa16.07■□□□□ 0.16
SMN2-213ENST00000614240 PLGP00747 810 aaPredicted RBP16.07■□□□□ 0.16
SMN2-213ENST00000614240 CGAP01215 116 aa16.07■□□□□ 0.16
SMN2-213ENST00000614240 CD8BP10966 210 aa16.07■□□□□ 0.16
SMN2-213ENST00000614240 CLDN20P56880 219 aa16.07■□□□□ 0.16
SMN2-213ENST00000614240 ZNF763Q0D2J5 394 aa16.07■□□□□ 0.16
SMN2-213ENST00000614240 IMPG1Q17R60 797 aa16.07■□□□□ 0.16
SMN2-213ENST00000614240 HS3ST6Q96QI5 342 aa16.07■□□□□ 0.16
SMN2-213ENST00000614240 KCNA7Q96RP8 456 aa16.07■□□□□ 0.16
SMN2-213ENST00000614240 MID1IP1Q9NPA3 183 aa16.07■□□□□ 0.16
SMN2-213ENST00000614240 GRID1Q9ULK0 1009 aa16.07■□□□□ 0.16
SMN2-213ENST00000614240 AP4B1Q9Y6B7 739 aa16.07■□□□□ 0.16
SMN2-213ENST00000614240 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.07■□□□□ 0.16
SMN2-213ENST00000614240 UPK1AO00322 258 aa16.06■□□□□ 0.16
SMN2-213ENST00000614240 IL33O95760 270 aa16.06■□□□□ 0.16
SMN2-213ENST00000614240 CCKARP32238 428 aa16.06■□□□□ 0.16
SMN2-213ENST00000614240 PRKAA2P54646 552 aa16.06■□□□□ 0.16
SMN2-213ENST00000614240 CTBP2P56545 445 aa16.06■□□□□ 0.16
SMN2-213ENST00000614240 GLYR1Q49A26 553 aaPredicted RBP16.06■□□□□ 0.16
SMN2-213ENST00000614240 FAM214BQ7L5A3 538 aa16.06■□□□□ 0.16
SMN2-213ENST00000614240 LCA5Q86VQ0 697 aa16.06■□□□□ 0.16
SMN2-213ENST00000614240 CCNYL1Q8N7R7 359 aa16.06■□□□□ 0.16
SMN2-213ENST00000614240 RTN4RQ9BZR6 473 aa16.06■□□□□ 0.16
SMN2-213ENST00000614240 C3orf14Q9HBI5 128 aa16.06■□□□□ 0.16
SMN2-213ENST00000614240 EMC9Q9Y3B6 208 aa16.06■□□□□ 0.16
SMN2-213ENST00000614240 TRIM64A6NGJ6 449 aa16.05■□□□□ 0.16
SMN2-213ENST00000614240 TRIM64BA6NI03 449 aa16.05■□□□□ 0.16
SMN2-213ENST00000614240 EIF1AYO14602 144 aaKnown RBP16.05■□□□□ 0.16
SMN2-213ENST00000614240 CRCPO75575 148 aa16.05■□□□□ 0.16
SMN2-213ENST00000614240 AQP8O94778 261 aa16.05■□□□□ 0.16
SMN2-213ENST00000614240 UTS2O95399 124 aa16.05■□□□□ 0.16
SMN2-213ENST00000614240 GABRA3P34903 492 aa16.05■□□□□ 0.16
SMN2-213ENST00000614240 EIF1AXP47813 144 aaKnown RBP16.05■□□□□ 0.16
SMN2-213ENST00000614240 PPP2R2BQ00005 443 aa16.05■□□□□ 0.16
SMN2-213ENST00000614240 C17orf67Q0P5P2 114 aa16.05■□□□□ 0.16
SMN2-213ENST00000614240 WHAMMP3Q1A5X7 153 aa16.05■□□□□ 0.16
SMN2-213ENST00000614240 PRSS53Q2L4Q9 553 aa16.05■□□□□ 0.16
SMN2-213ENST00000614240 TIFABQ6ZNK6 161 aa16.05■□□□□ 0.16
SMN2-213ENST00000614240 PLEKHM3Q6ZWE6 761 aa16.05■□□□□ 0.16
SMN2-213ENST00000614240 OR2L13Q8N349 312 aa16.05■□□□□ 0.16
SMN2-213ENST00000614240 MMGT1Q8N4V1 131 aa16.05■□□□□ 0.16
SMN2-213ENST00000614240 METTL25Q8N6Q8 603 aa16.05■□□□□ 0.16
SMN2-213ENST00000614240 CAVIN3Q969G5 261 aa16.05■□□□□ 0.16
SMN2-213ENST00000614240 L3HYPDHQ96EM0 354 aa16.05■□□□□ 0.16
SMN2-213ENST00000614240 GLIPR2Q9H4G4 154 aa16.05■□□□□ 0.16
SMN2-213ENST00000614240 FANCFQ9NPI8 374 aa16.05■□□□□ 0.16
SMN2-213ENST00000614240 SIRT5Q9NXA8 310 aa16.05■□□□□ 0.16
SMN2-213ENST00000614240 POLR3HQ9Y535 204 aaPredicted RBP16.05■□□□□ 0.16
SMN2-213ENST00000614240 GOLGA8RI6L899 631 aa16.04■□□□□ 0.16
SMN2-213ENST00000614240 KCNH1O95259 989 aa16.04■□□□□ 0.16
SMN2-213ENST00000614240 ANGPTL1O95841 491 aa16.04■□□□□ 0.16
SMN2-213ENST00000614240 PPP3CBP16298 524 aa16.04■□□□□ 0.16
SMN2-213ENST00000614240 BEX5Q5H9J7 111 aa16.04■□□□□ 0.16
SMN2-213ENST00000614240 FAM71E1Q6IPT2 247 aa16.04■□□□□ 0.16
SMN2-213ENST00000614240 GPR151Q8TDV0 419 aa16.04■□□□□ 0.16
SMN2-213ENST00000614240 ELP4Q96EB1 424 aa16.04■□□□□ 0.16
SMN2-213ENST00000614240 C11orf24Q96F05 449 aaPredicted RBP16.04■□□□□ 0.16
SMN2-213ENST00000614240 AMDHD1Q96NU7 426 aa16.04■□□□□ 0.16
SMN2-213ENST00000614240 MYNNQ9NPC7 610 aa16.04■□□□□ 0.16
SMN2-213ENST00000614240 EQTNQ9NQ60 294 aa16.04■□□□□ 0.16
SMN2-213ENST00000614240 TAS2R7Q9NYW3 318 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms