RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 DTX4Q9Y2E6 619 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 KCNE3Q9Y6H6 103 aa10.58□□□□□ -0.72
SLIRP-212ENST00000613856 CELSR2Q9HCU4 2923 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 IGHV1-45A0A0A0MS14 117 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 A0A0G2JPF8 293 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 LOC101059948A0A1B0GTJ6 334 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 FRG2CA6NGY1 282 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 HNRNPCL2B2RXH8 293 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 HNRNPCL3B7ZW38 293 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 SEMA7AO75326 666 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 SERPINA1P01009 418 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 IFNA14P01570 189 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 CHRM4P08173 479 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 HNRNPCL4P0DMR1 293 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 CT45A8P0DMV1 189 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 CT45A9P0DMV2 189 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 COX6A1P12074 109 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 ETS2P15036 469 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 GNLYP22749 145 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 PSMA4P25789 261 aaKnown RBP10.57□□□□□ -0.72
SLIRP-212ENST00000613856 SLC7A1P30825 629 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 DLSTP36957 453 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 PPICP45877 212 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 CD97P48960 835 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 SLC26A5P58743 744 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 POU6F2P78424 691 aaPredicted RBP10.57□□□□□ -0.72
SLIRP-212ENST00000613856 HPCAP84074 193 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 CDC20Q12834 499 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 SSPNQ14714 243 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 DEFB109BQ30KR1 87 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 LRRC23Q53EV4 343 aaPredicted RBP10.57□□□□□ -0.72
SLIRP-212ENST00000613856 CT45A2Q5DJT8 189 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 DCST2Q5T1A1 773 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 NPSR1Q6W5P4 371 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 EIF3MQ7L2H7 374 aaKnown RBP10.57□□□□□ -0.72
SLIRP-212ENST00000613856 SLC29A4Q7RTT9 530 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 WDR53Q7Z5U6 358 aaPredicted RBP10.57□□□□□ -0.72
SLIRP-212ENST00000613856 KRT73Q86Y46 540 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 C9orf40Q8IXQ3 194 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 ZNF321PQ8N8H1 164 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 ZNF441Q8N8Z8 693 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 APCDD1LQ8NCL9 501 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 GPR151Q8TDV0 419 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 ADIPOR1Q96A54 375 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 VPS50Q96JG6 964 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 ZNF607Q96SK3 696 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 TREX2Q9BQ50 279 aaPredicted RBP10.57□□□□□ -0.72
SLIRP-212ENST00000613856 WWTR1Q9GZV5 400 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 SAP130Q9H0E3 1048 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 SLC38A1Q9H2H9 487 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 MAGIXQ9H6Y5 334 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 RUBCNLQ9H714 662 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 DCLRE1BQ9H816 532 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 S100A14Q9HCY8 104 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 Q9N2J8 555 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 KCND3Q9UK17 655 aa10.57□□□□□ -0.72
SLIRP-212ENST00000613856 GPR55Q9Y2T6 319 aaPredicted RBP10.57□□□□□ -0.72
SLIRP-212ENST00000613856 GPC6Q9Y625 555 aaPredicted RBP10.57□□□□□ -0.72
SLIRP-212ENST00000613856 MRPS18BQ9Y676 258 aaKnown RBP10.57□□□□□ -0.72
SLIRP-212ENST00000613856 NINQ8N4C6 2090 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 CSMD1Q96PZ7 3565 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 IGHV3-20A0A0C4DH32 117 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 H3BNX3 289 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 SOCS6O14544 535 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 TO15178 435 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 ACOX3O15254 700 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 KIAA0513O60268 411 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 NME6O75414 186 aaPredicted RBP10.56□□□□□ -0.72
SLIRP-212ENST00000613856 KRT36O76013 467 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 SEC24DO94855 1032 aaPredicted RBP10.56□□□□□ -0.72
SLIRP-212ENST00000613856 H6PDO95479 791 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 ATP6V1G2O95670 118 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 PDGFAP04085 211 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 DRD5P21918 477 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 AQP1P29972 269 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 GABRA3P34903 492 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 PIGAP37287 484 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 AP2B1P63010 937 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 EXT1Q16394 746 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 CYP27C1Q4G0S4 372 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 GPAT3Q53EU6 434 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 CYBRD1Q53TN4 286 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 RPS26P11Q5JNZ5 115 aaPredicted RBP10.56□□□□□ -0.72
SLIRP-212ENST00000613856 FRRS1Q6ZNA5 592 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 PPP1R32Q7Z5V6 425 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 SLC44A2Q8IWA5 706 aaPredicted RBP10.56□□□□□ -0.72
SLIRP-212ENST00000613856 PAPD5Q8NDF8 572 aaKnown RBP10.56□□□□□ -0.72
SLIRP-212ENST00000613856 OR11G2Q8NGC1 345 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 NUBPLQ8TB37 319 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 FAM110BQ8TC76 370 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 RASSF5Q8WWW0 418 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 OIT3Q8WWZ8 545 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 PYDC1Q8WXC3 89 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 TP53INP1Q96A56 240 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 SLCO4A1Q96BD0 722 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 TAMM41Q96BW9 452 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 C8orf44Q96CB5 159 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 LCORQ96JN0 433 aaPredicted RBP10.56□□□□□ -0.72
SLIRP-212ENST00000613856 IMMP1LQ96LU5 166 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 SDF2Q99470 211 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms