RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 PRSS16Q9NQE7 514 aa19.04■□□□□ 0.64
CTDP1-208ENST00000613122 IL20RAQ9UHF4 553 aa19.04■□□□□ 0.64
CTDP1-208ENST00000613122 TRIM64BA6NI03 449 aa19.04■□□□□ 0.64
CTDP1-208ENST00000613122 YKT6O15498 198 aa19.04■□□□□ 0.64
CTDP1-208ENST00000613122 EEF1E1O43324 174 aaKnown RBP19.04■□□□□ 0.64
CTDP1-208ENST00000613122 TNFSF4P23510 183 aa19.04■□□□□ 0.64
CTDP1-208ENST00000613122 ALKAL1Q6UXT8 129 aa19.04■□□□□ 0.64
CTDP1-208ENST00000613122 MS4A15Q8N5U1 240 aa19.04■□□□□ 0.64
CTDP1-208ENST00000613122 PNPLA1Q8N8W4 532 aa19.04■□□□□ 0.64
CTDP1-208ENST00000613122 CDS1Q92903 461 aa19.04■□□□□ 0.64
CTDP1-208ENST00000613122 ZNF226Q9NYT6 803 aa19.04■□□□□ 0.64
CTDP1-208ENST00000613122 BOKQ9UMX3 212 aaPredicted RBP19.04■□□□□ 0.64
CTDP1-208ENST00000613122 CAMK2AQ9UQM7 478 aa19.04■□□□□ 0.64
CTDP1-208ENST00000613122 ACTL6BO94805 426 aa19.04■□□□□ 0.64
CTDP1-208ENST00000613122 UQCRC1P31930 480 aa19.04■□□□□ 0.64
CTDP1-208ENST00000613122 MGLLQ99685 303 aa19.04■□□□□ 0.64
CTDP1-208ENST00000613122 POTEKPQ9BYX7 375 aa19.04■□□□□ 0.64
CTDP1-208ENST00000613122 MMP27Q9H306 513 aa19.04■□□□□ 0.64
CTDP1-208ENST00000613122 GSTO2Q9H4Y5 243 aa19.04■□□□□ 0.64
CTDP1-208ENST00000613122 FAM118AQ9NWS6 357 aa19.04■□□□□ 0.64
CTDP1-208ENST00000613122 EMC3Q9P0I2 261 aa19.04■□□□□ 0.64
CTDP1-208ENST00000613122 ZBTB42B2RXF5 422 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 ICAM2P13598 275 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 UGT8Q16880 541 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 MANEAQ5SRI9 462 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 NETO1Q8TDF5 533 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 MYLIPQ8WY64 445 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 GCDHQ92947 438 aaPredicted RBP19.03■□□□□ 0.64
CTDP1-208ENST00000613122 CREB3L1Q96BA8 519 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 HIF3AQ9Y2N7 669 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 SNNO75324 88 aaPredicted RBP19.03■□□□□ 0.64
CTDP1-208ENST00000613122 FGF4P08620 206 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 OSMP13725 252 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 FUT1P19526 365 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 TNFRSF1BP20333 461 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 PITPNBP48739 271 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 FAM189BP81408 668 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 SPPL3Q8TCT6 385 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 CBLCQ9ULV8 474 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 NPIPA5A0A0B4J1W7 369 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 NPIPA7E9PJI5 369 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 NPIPA8P0DM63 369 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 HSD17B1P14061 328 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 HSF5Q4G112 596 aaPredicted RBP19.03■□□□□ 0.64
CTDP1-208ENST00000613122 FAM76BQ5HYJ3 339 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 ADAMTS6Q9UKP5 1117 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 NUP50Q9UKX7 468 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 RGPD2P0DJD1 1756 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 MROH6A6NGR9 719 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 ACPPP15309 386 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 AOAHP28039 575 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 PSMB5P28074 263 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 CD97P48960 835 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 ARF3P61204 181 aaPredicted RBP19.03■□□□□ 0.64
CTDP1-208ENST00000613122 ARF1P84077 181 aaKnown RBP19.03■□□□□ 0.64
CTDP1-208ENST00000613122 PIGFQ07326 219 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 PIGGQ5H8A4 983 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 SLC35F2Q8IXU6 374 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 OR9A4Q8NGU2 314 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 ADOQ96SZ5 270 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 ZIC5Q96T25 663 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 INSM2Q96T92 566 aaPredicted RBP19.03■□□□□ 0.64
CTDP1-208ENST00000613122 GPR52Q9Y2T5 361 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 A0A1B0GTW7 788 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 CNOT4O95628 575 aaKnown RBP19.03■□□□□ 0.64
CTDP1-208ENST00000613122 CSNK1A1P48729 337 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 GTDC1Q4AE62 458 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 TMEM236Q5W0B7 351 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 LCN8Q6JVE9 175 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 MEPEQ9NQ76 525 aaPredicted RBP19.03■□□□□ 0.64
CTDP1-208ENST00000613122 ABRACLQ9P1F3 81 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 REV1Q9UBZ9 1251 aa19.03■□□□□ 0.64
CTDP1-208ENST00000613122 PIGBOS1A0A0B4J2F0 54 aa19.02■□□□□ 0.64
CTDP1-208ENST00000613122 CASC3O15234 703 aaKnown RBP19.02■□□□□ 0.64
CTDP1-208ENST00000613122 SRPX2O60687 465 aaPredicted RBP19.02■□□□□ 0.64
CTDP1-208ENST00000613122 HMGN2P05204 90 aaKnown RBP19.02■□□□□ 0.64
CTDP1-208ENST00000613122 YES1P07947 543 aa19.02■□□□□ 0.64
CTDP1-208ENST00000613122 ATXN7L3Q14CW9 347 aaPredicted RBP19.02■□□□□ 0.64
CTDP1-208ENST00000613122 TRIM46Q7Z4K8 759 aa19.02■□□□□ 0.64
CTDP1-208ENST00000613122 GPN2Q9H9Y4 310 aaPredicted RBP19.02■□□□□ 0.64
CTDP1-208ENST00000613122 FAM86C1Q9NVL1 165 aa19.02■□□□□ 0.64
CTDP1-208ENST00000613122 STUB1Q9UNE7 303 aa19.02■□□□□ 0.64
CTDP1-208ENST00000613122 HSPE1-MOB4S4R3N1 261 aa19.02■□□□□ 0.64
CTDP1-208ENST00000613122 CHD4Q14839 1912 aa19.02■□□□□ 0.64
CTDP1-208ENST00000613122 ATG12O94817 140 aa19.02■□□□□ 0.64
CTDP1-208ENST00000613122 RGRP47804 291 aa19.02■□□□□ 0.64
CTDP1-208ENST00000613122 EXOSC7Q15024 291 aaKnown RBP19.02■□□□□ 0.64
CTDP1-208ENST00000613122 FCRLBQ6BAA4 426 aa19.02■□□□□ 0.64
CTDP1-208ENST00000613122 XKRXQ6PP77 449 aa19.02■□□□□ 0.64
CTDP1-208ENST00000613122 XKR5Q6UX68 686 aa19.02■□□□□ 0.64
CTDP1-208ENST00000613122 OR5D16Q8NGK9 328 aa19.02■□□□□ 0.64
CTDP1-208ENST00000613122 ZNF480Q8WV37 535 aa19.02■□□□□ 0.64
CTDP1-208ENST00000613122 NTMT1Q9BV86 223 aa19.02■□□□□ 0.64
CTDP1-208ENST00000613122 KCNN3Q9UGI6 736 aa19.02■□□□□ 0.64
CTDP1-208ENST00000613122 CCL26Q9Y258 94 aa19.02■□□□□ 0.64
CTDP1-208ENST00000613122 RPS17P08708 135 aaKnown RBP19.02■□□□□ 0.64
CTDP1-208ENST00000613122 ARL3P36405 182 aa19.02■□□□□ 0.64
CTDP1-208ENST00000613122 UGT2A3Q6UWM9 527 aa19.02■□□□□ 0.64
CTDP1-208ENST00000613122 OR2A12Q8NGT7 310 aa19.02■□□□□ 0.64
CTDP1-208ENST00000613122 ZNF431Q8TF32 576 aaPredicted RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms